Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:55:26.084495"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| WUR | Huijsmans, Jan | 1 | 2024-02-22 |
2. Contributors
| contributor | institute |
|---|---|
| ?? | WUR |
3. File and directory names
## [1] "../../data-submitted/03/WUR"## [1] "../../data-submitted/03/WUR/WUR_grass_2024.xlsx"4. Location
## Skipping map because lat/long not provided.5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## bta (cum. time since application began) is not available.Missing or double interval number
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## OKMissing time between intervals
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
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## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."Measurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| IHF | 2354 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 2354 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : No values to check.
## soil.temp.surf : No values to check.
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : No values to check.
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## pub.id rep plot.area lat long
## 2354 2354 953 2354 2354
## topo soil.samp.z clay silt sand
## 2354 2354 2354 2354 2354
## oc soil.water soil.water.v soil.moist soil.ph
## 2354 2354 1021 2354 2354
## soil.dens crop.res till man.source.det man.bed
## 2354 2354 2354 2354 2354
## man.con man.trt2 man.trt3 man.stor man.vs
## 2354 2354 2354 2354 2354
## man.tkn man.tic man.ua man.vfa man.ph
## 2354 2354 2354 2354 198
## app.start app.end time.incorp man.area dist.inj
## 2354 2354 2354 2354 2354
## furrow.z furrow.w crop.z crop.area lai
## 2354 2354 129 2354 2354
## notes.plot app.start.orig app.end.orig t.start t.end
## 2345 2354 2354 2354 2354
## bg.dl bg.val bg.unit pH.surf air.temp
## 2354 2354 2354 2354 6
## soil.temp soil.temp.z soil.temp.surf rad MOL
## 2354 2354 2354 767 2354
## ustar rl air.pres air.pres.unit rh
## 2354 2354 2354 2354 2354
## wind.loc far.loc notes.int t.start.orig t.end.orig
## 2354 2354 2353 953 953
## dt.calc dt.diff bta pub.info soil.type2
## 2354 2354 2354 2354 2354
## exper2 rep2 date.start
## 2354 2354 2354Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
## Warning: Removed 6 rows containing missing values or values outside the scale range
## (`geom_line()`).## Warning: Removed 6 rows containing missing values or values outside the scale range
## (`geom_point()`).
Manure and application
10. dfsumm summary
Plot-level data
##
## 294 rows and 195 columns
## 294 unique rows
## pub.id proj exper
## Class logical character character
## Minimum <NA> G1989-13 G1989-13
## Maximum <NA> G2021-45 G2021-45
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 0 113 113
## Missing values 294 0 0
## Sorted <NA> TRUE TRUE
##
## cpmid
## Class character
## Minimum D:1.I:WUR.Pr:G1989-13.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G1989-13.F:1-Hardenberg.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Maximum D:1.I:WUR.Pr:G2021-45.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G2021-45.F:Wageningen.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Mean <NA>
## Unique (excld. NA) 294
## Missing values 0
## Sorted TRUE
##
## field plot rep plot.area lat long
## Class character numeric logical numeric numeric numeric
## Minimum 1-Hardenberg 1 <NA> 976 <NA> <NA>
## Maximum Zegveld 400 <NA> 2400 <NA> <NA>
## Mean <NA> 25.8 <NA> 1590 <NA> <NA>
## Unique (excld. NA) 227 111 0 181 0 0
## Missing values 0 0 294 109 294 294
## Sorted FALSE FALSE <NA> FALSE <NA> <NA>
##
## country topo soil.samp.z clay silt sand
## Class character logical logical logical logical logical
## Minimum NL <NA> <NA> <NA> <NA> <NA>
## Maximum NL <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0 0 0
## Missing values 0 294 294 294 294 294
## Sorted TRUE <NA> <NA> <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical character logical numeric logical logical
## Minimum <NA> clay <NA> 13.1 <NA> <NA>
## Maximum <NA> sand <NA> 67 <NA> <NA>
## Mean <NA> <NA> <NA> 32.2 <NA> <NA>
## Unique (excld. NA) 0 3 0 77 0 0
## Missing values 294 0 294 133 294 294
## Sorted <NA> FALSE <NA> FALSE <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det man.bed
## Class logical logical logical character logical logical
## Minimum <NA> <NA> <NA> dairy <NA> <NA>
## Maximum <NA> <NA> <NA> pig <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 3 0 0
## Missing values 294 294 294 0 294 294
## Sorted <NA> <NA> <NA> FALSE <NA> <NA>
##
## man.con man.trt1 man.trt2 man.trt3 man.stor man.dm man.vs
## Class logical character logical logical logical numeric logical
## Minimum <NA> Acidified <NA> <NA> <NA> 3.4 <NA>
## Maximum <NA> None <NA> <NA> <NA> 11.9 <NA>
## Mean <NA> <NA> <NA> <NA> <NA> 7.6 <NA>
## Unique (excld. NA) 0 4 0 0 0 123 0
## Missing values 294 0 294 294 294 0 294
## Sorted <NA> FALSE <NA> <NA> <NA> FALSE <NA>
##
## man.tkn man.tan man.tic man.ua man.vfa man.ph
## Class logical numeric logical logical logical numeric
## Minimum <NA> 0.75 <NA> <NA> <NA> 6
## Maximum <NA> 7.12 <NA> <NA> <NA> 8.2
## Mean <NA> 2.21 <NA> <NA> <NA> 7.22
## Unique (excld. NA) 0 151 0 0 0 25
## Missing values 294 0 294 294 294 23
## Sorted <NA> FALSE <NA> <NA> <NA> FALSE
##
## app.start app.end app.method app.rate
## Class POSIXct, POSIXt POSIXct, POSIXt character numeric
## Minimum <NA> <NA> bc 6.6
## Maximum <NA> <NA> ts 53.8
## Mean <NA> <NA> <NA> 20
## Unique (excld. NA) 0 0 3 264
## Missing values 294 294 0 0
## Sorted <NA> <NA> FALSE FALSE
##
## app.rate.unit incorp time.incorp man.area dist.inj
## Class character character numeric logical logical
## Minimum t/ha none <NA> <NA> <NA>
## Maximum t/ha none <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0
## Missing values 0 0 294 294 294
## Sorted TRUE TRUE <NA> <NA> <NA>
##
## furrow.z furrow.w crop crop.z crop.area lai
## Class logical logical character numeric numeric logical
## Minimum <NA> <NA> grass 3.7 <NA> <NA>
## Maximum <NA> <NA> grass 14.1 <NA> <NA>
## Mean <NA> <NA> <NA> 7.49 <NA> <NA>
## Unique (excld. NA) 0 0 1 70 0 0
## Missing values 294 294 0 18 294 294
## Sorted <NA> <NA> TRUE FALSE <NA> <NA>
##
## notes.plot row.in.file.plot institute sub.period
## Class character numeric character numeric
## Minimum . 5 WUR 3
## Maximum . 298 WUR 3
## Mean <NA> 152 <NA> 3
## Unique (excld. NA) 1 294 1 1
## Missing values 293 0 0 0
## Sorted TRUE FALSE TRUE TRUE
##
## file treat
## Class character numeric
## Minimum ../../data-submitted/03/WUR/WUR_grass_2024.xlsx 1
## Maximum ../../data-submitted/03/WUR/WUR_grass_2024.xlsx 400
## Mean <NA> 25.8
## Unique (excld. NA) 1 111
## Missing values 0 0
## Sorted TRUE FALSE
##
## meas.tech meas.tech.det app.start.orig app.end.orig
## Class character character logical logical
## Minimum IHF IHF <NA> <NA>
## Maximum IHF IHF <NA> <NA>
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0
## Missing values 0 0 294 294
## Sorted TRUE TRUE <NA> <NA>
##
## cpid
## Class character
## Minimum D:1.I:WUR.Pr:G1989-13.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G1989-13.F:1-Hardenberg.P:1.T:1.R:NA.R2:.T:NA
## Maximum D:1.I:WUR.Pr:G2021-45.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G2021-45.F:Wageningen.P:1.T:1.R:NA.R2:.T:NA
## Mean <NA>
## Unique (excld. NA) 294
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:WUR.Pr:G1989-13.E:G1989-13 Huijsmans, Jan
## Maximum D:1.I:WUR.Pr:G2021-45.E:G2021-45 Huijsmans, Jan
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 113 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app e.1 e.4 e.6 e.12 e.24 e.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 14.2 0 0.0324 0.0965 0.167 0.279 0.279
## Maximum 151 30.3 54.2 58.8 60.3 61.8 67.6
## Mean 41.1 3.38 7.16 8.67 10.1 10.7 11.8
## Unique (excld. NA) 289 223 294 294 285 275 249
## Missing values 0 71 0 0 9 19 45
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.72 e.96 e.168 e.final e.tot e.cum.1 e.cum.4
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.279 0.279 <NA> 0.0987 0.0987 0 0.0324
## Maximum 43.4 42.7 <NA> 69.1 69.1 30.3 54.2
## Mean 12.5 11.7 <NA> 12.2 12.2 3.38 7.16
## Unique (excld. NA) 205 64 0 294 294 223 294
## Missing values 89 230 294 0 0 71 0
## Sorted FALSE FALSE <NA> FALSE FALSE FALSE FALSE
##
## e.cum.6 e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.0965 0.167 0.279 0.279 0.279 0.279
## Maximum 58.8 60.3 61.8 67.6 43.4 42.7
## Mean 8.67 10.1 10.7 11.8 12.5 11.7
## Unique (excld. NA) 294 285 275 249 205 64
## Missing values 0 9 19 45 89 230
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.168 e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum <NA> 0.0987 0.0987 0 0.00131 0.00353
## Maximum <NA> 69.1 69.1 0.437 0.841 0.894
## Mean <NA> 12.2 12.2 0.0973 0.193 0.231
## Unique (excld. NA) 0 294 294 218 294 294
## Missing values 294 0 0 71 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE FALSE
##
## e.rel.12 e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.00613 0.0103 0.0103 0.0103 0.0103 <NA>
## Maximum 0.913 0.92 0.975 0.998 0.949 <NA>
## Mean 0.268 0.285 0.32 0.343 0.318 <NA>
## Unique (excld. NA) 285 275 249 205 64 0
## Missing values 9 19 45 89 230 294
## Sorted FALSE FALSE FALSE FALSE FALSE <NA>
##
## e.rel.final e.rel.tot rain.1 rain.4 rain.6 rain.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.00398 0.00398 0 0 0 0
## Maximum 1 1 0 0 0 0
## Mean 0.319 0.319 0 0 0 0
## Unique (excld. NA) 294 294 1 1 1 1
## Missing values 0 0 71 0 0 9
## Sorted FALSE FALSE TRUE TRUE TRUE TRUE
##
## rain.24 rain.48 rain.72 rain.96 rain.168 rain.final rain.tot
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 <NA> 0 0
## Maximum 0 0 0 0 <NA> 0 0
## Mean 0 0 0 0 <NA> 0 0
## Unique (excld. NA) 1 1 1 1 0 1 1
## Missing values 19 45 89 230 294 0 0
## Sorted TRUE TRUE TRUE TRUE <NA> TRUE TRUE
##
## air.temp.1 air.temp.4 air.temp.6 air.temp.12 air.temp.24
## Class numeric numeric numeric numeric numeric
## Minimum 2.4 3.27 3.27 4.39 3.14
## Maximum 28.7 29.9 30.3 30.2 25.2
## Mean 15 15.9 16.3 17.1 14.7
## Unique (excld. NA) 154 286 290 293 293
## Missing values 72 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.48 air.temp.72 air.temp.96 air.temp.168 air.temp.mn
## Class numeric numeric numeric numeric numeric
## Minimum 3.72 4.24 4.24 4.24 4.24
## Maximum 25.5 25.5 25.5 25.5 25.5
## Mean 14.4 14.2 14.2 14.2 14.2
## Unique (excld. NA) 293 293 293 293 293
## Missing values 1 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.1 wind.4 wind.6 wind.12 wind.24 wind.48 wind.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.7 0.909 0.912 1.28 0.695 0.778 0.889
## Maximum 7.45 11.2 11.6 10.6 7.58 7.58 7.58
## Mean 3.06 3.38 3.46 3.48 2.82 2.87 2.92
## Unique (excld. NA) 160 287 289 294 294 294 294
## Missing values 71 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.96 wind.168 wind.mn wind.2m.1 wind.2m.4 wind.2m.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.05 1.11 1.11 0.7 0.909 0.912
## Maximum 7.58 7.58 7.58 7.45 11.2 11.6
## Mean 2.93 2.93 2.93 3.06 3.38 3.46
## Unique (excld. NA) 294 294 294 160 287 289
## Missing values 0 0 0 71 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.12 wind.2m.24 wind.2m.48 wind.2m.72 wind.2m.96
## Class numeric numeric numeric numeric numeric
## Minimum 1.28 0.695 0.778 0.889 1.05
## Maximum 10.6 7.58 7.58 7.58 7.58
## Mean 3.48 2.82 2.87 2.92 2.93
## Unique (excld. NA) 294 294 294 294 294
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.168 wind.2m.mn rad.1 rad.4 rad.6 rad.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.11 1.11 38.9 57 80.5 104
## Maximum 7.58 7.58 868 1380 1380 1540
## Mean 2.93 2.93 415 724 793 887
## Unique (excld. NA) 294 294 135 189 189 189
## Missing values 0 0 123 105 105 105
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## rad.24 rad.48 rad.72 rad.96 rad.168 rad.mn rain.rate.1
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 102 72.6 92.6 98.7 122 122 0
## Maximum 1500 991 971 991 991 991 0
## Mean 600 481 482 512 528 528 0
## Unique (excld. NA) 189 189 189 189 189 189 1
## Missing values 105 105 105 105 105 105 71
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE TRUE
##
## rain.rate.4 rain.rate.6 rain.rate.12 rain.rate.24
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.48 rain.rate.72 rain.rate.96 rain.rate.168
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.mn first.row.in.file.int last.row.in.file.int
## Class numeric numeric numeric
## Minimum 0 5 13
## Maximum 0 2350 2360
## Mean 0 1220 1230
## Unique (excld. NA) 1 294 294
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## n.ints dt1 j.rel1 j.NH31 dt.min dt.max ct.min
## Class integer numeric numeric numeric numeric numeric numeric
## Minimum 4 0.4 0 0 0.4 2.8 0.4
## Maximum 9 1.73 0.604 41.2 1.73 27.7 1.73
## Mean 8.01 0.787 0.0957 3.36 0.787 22.7 0.787
## Unique (excld. NA) 6 41 275 290 41 145 41
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## ct.max t.start.p t.end.p air.temp.z
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 7.9 <NA> <NA> 1.5
## Maximum 100 <NA> <NA> 1.5
## Mean 79.4 <NA> <NA> 1.5
## Unique (excld. NA) 239 0 0 1
## Missing values 0 294 294 0
## Sorted FALSE <NA> <NA> TRUE
##
## soil.temp.z wind.z wind.loc far.loc pub.info soil.type2
## Class logical numeric logical logical logical logical
## Minimum <NA> 2 <NA> <NA> <NA> <NA>
## Maximum <NA> 2 <NA> <NA> <NA> <NA>
## Mean <NA> 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 0
## Missing values 294 0 294 294 294 294
## Sorted <NA> TRUE <NA> <NA> <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig
## Class logical logical logical character
## Minimum <NA> <NA> FALSE IHF
## Maximum <NA> <NA> TRUE IHF
## Mean <NA> <NA> 0.0272108843537415 TRUE <NA>
## Unique (excld. NA) 0 0 2 1
## Missing values 294 294 0 0
## Sorted <NA> <NA> FALSE TRUE
##
## meas.tech2 crop.orig man.source.orig app.method.orig
## Class character character character character
## Minimum micro met grass dairy Broadcast
## Maximum micro met grass pig Trailing shoe
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 3 3
## Missing values 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE
##
## app.method2 incorp.orig date.start
## Class character character Date
## Minimum bc None <NA>
## Maximum ts None <NA>
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 3 1 0
## Missing values 0 0 294
## Sorted FALSE TRUE <NA>
## Interval-level emission data
##
## 2354 rows and 138 columns
## 2354 unique rows
## cpmid
## Class character
## Minimum D:1.I:WUR.Pr:G1989-13.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G1989-13.F:1-Hardenberg.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Maximum D:1.I:WUR.Pr:G2021-45.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G2021-45.F:Wageningen.P:1.T:1.R:NA.R2:.T:NA.M:IHFIHF
## Mean <NA>
## Unique (excld. NA) 294
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class logical character character character numeric logical
## Minimum <NA> G1989-13 G1989-13 1-Hardenberg 1 <NA>
## Maximum <NA> G2021-45 G2021-45 Zegveld 400 <NA>
## Mean <NA> <NA> <NA> <NA> 27.8 <NA>
## Unique (excld. NA) 0 113 113 227 111 0
## Missing values 2354 0 0 0 0 2354
## Sorted <NA> TRUE TRUE FALSE FALSE <NA>
##
## treat meas.tech meas.tech.det plot.area lat long
## Class numeric character character numeric numeric numeric
## Minimum 1 IHF IHF 976 <NA> <NA>
## Maximum 400 IHF IHF 2400 <NA> <NA>
## Mean 27.8 <NA> <NA> 1600 <NA> <NA>
## Unique (excld. NA) 111 1 1 181 0 0
## Missing values 0 0 0 953 2354 2354
## Sorted FALSE TRUE TRUE FALSE <NA> <NA>
##
## country topo soil.samp.z clay silt sand
## Class character logical logical logical logical logical
## Minimum NL <NA> <NA> <NA> <NA> <NA>
## Maximum NL <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0 0 0
## Missing values 0 2354 2354 2354 2354 2354
## Sorted TRUE <NA> <NA> <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical character logical numeric logical logical
## Minimum <NA> clay <NA> 13.1 <NA> <NA>
## Maximum <NA> sand <NA> 67 <NA> <NA>
## Mean <NA> <NA> <NA> 32.4 <NA> <NA>
## Unique (excld. NA) 0 3 0 77 0 0
## Missing values 2354 0 2354 1021 2354 2354
## Sorted <NA> FALSE <NA> FALSE <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det man.bed
## Class logical logical logical character logical logical
## Minimum <NA> <NA> <NA> dairy <NA> <NA>
## Maximum <NA> <NA> <NA> pig <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 3 0 0
## Missing values 2354 2354 2354 0 2354 2354
## Sorted <NA> <NA> <NA> FALSE <NA> <NA>
##
## man.con man.trt1 man.trt2 man.trt3 man.stor man.dm man.vs
## Class logical character logical logical logical numeric logical
## Minimum <NA> Acidified <NA> <NA> <NA> 3.4 <NA>
## Maximum <NA> None <NA> <NA> <NA> 11.9 <NA>
## Mean <NA> <NA> <NA> <NA> <NA> 7.62 <NA>
## Unique (excld. NA) 0 4 0 0 0 123 0
## Missing values 2354 0 2354 2354 2354 0 2354
## Sorted <NA> FALSE <NA> <NA> <NA> FALSE <NA>
##
## man.tkn man.tan man.tic man.ua man.vfa man.ph
## Class logical numeric logical logical logical numeric
## Minimum <NA> 0.75 <NA> <NA> <NA> 6
## Maximum <NA> 7.12 <NA> <NA> <NA> 8.2
## Mean <NA> 2.23 <NA> <NA> <NA> 7.21
## Unique (excld. NA) 0 151 0 0 0 25
## Missing values 2354 0 2354 2354 2354 198
## Sorted <NA> FALSE <NA> <NA> <NA> FALSE
##
## app.start app.end app.method app.rate
## Class POSIXct, POSIXt POSIXct, POSIXt character numeric
## Minimum <NA> <NA> bc 6.6
## Maximum <NA> <NA> ts 53.8
## Mean <NA> <NA> <NA> 19.6
## Unique (excld. NA) 0 0 3 264
## Missing values 2354 2354 0 0
## Sorted <NA> <NA> FALSE FALSE
##
## app.rate.unit incorp time.incorp man.area dist.inj
## Class character character numeric logical logical
## Minimum t/ha none <NA> <NA> <NA>
## Maximum t/ha none <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0
## Missing values 0 0 2354 2354 2354
## Sorted TRUE TRUE <NA> <NA> <NA>
##
## furrow.z furrow.w crop crop.z crop.area lai
## Class logical logical character numeric numeric logical
## Minimum <NA> <NA> grass 3.7 <NA> <NA>
## Maximum <NA> <NA> grass 14.1 <NA> <NA>
## Mean <NA> <NA> <NA> 7.52 <NA> <NA>
## Unique (excld. NA) 0 0 1 70 0 0
## Missing values 2354 2354 0 129 2354 2354
## Sorted <NA> <NA> TRUE FALSE <NA> <NA>
##
## notes.plot row.in.file.plot institute sub.period
## Class character numeric character numeric
## Minimum . 5 WUR 3
## Maximum . 298 WUR 3
## Mean <NA> 146 <NA> 3
## Unique (excld. NA) 1 294 1 1
## Missing values 2345 0 0 0
## Sorted TRUE FALSE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/WUR/WUR_grass_2024.xlsx
## Maximum ../../data-submitted/03/WUR/WUR_grass_2024.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class logical logical
## Minimum <NA> <NA>
## Maximum <NA> <NA>
## Mean <NA> <NA>
## Unique (excld. NA) 0 0
## Missing values 2354 2354
## Sorted <NA> <NA>
##
## cpid
## Class character
## Minimum D:1.I:WUR.Pr:G1989-13.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G1989-13.F:1-Hardenberg.P:1.T:1.R:NA.R2:.T:NA
## Maximum D:1.I:WUR.Pr:G2021-45.F:../../data-submitted/03/WUR/WUR_grass_2024.xlsx.E:G2021-45.F:Wageningen.P:1.T:1.R:NA.R2:.T:NA
## Mean <NA>
## Unique (excld. NA) 294
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:WUR.Pr:G1989-13.E:G1989-13 Huijsmans, Jan
## Maximum D:1.I:WUR.Pr:G2021-45.E:G2021-45 Huijsmans, Jan
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 113 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app interval t.start t.end dt
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 14.2 1 <NA> <NA> 0.4
## Maximum 151 9 <NA> <NA> 27.7
## Mean 40.8 4.61 <NA> <NA> 9.92
## Unique (excld. NA) 289 9 0 0 653
## Missing values 0 0 2354 2354 0
## Sorted FALSE FALSE <NA> <NA> FALSE
##
## bg.dl bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class logical logical logical numeric character logical numeric
## Minimum <NA> <NA> <NA> 0 kg N/ha-hr <NA> 1.46
## Maximum <NA> <NA> <NA> 41.2 kg N/ha-hr <NA> 32.2
## Mean <NA> <NA> <NA> 0.969 <NA> <NA> 15.5
## Unique (excld. NA) 0 0 0 2166 1 0 768
## Missing values 2354 2354 2354 0 0 2354 6
## Sorted <NA> <NA> <NA> FALSE TRUE <NA> FALSE
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical logical numeric
## Minimum 1.5 <NA> <NA> <NA> 37.4
## Maximum 1.5 <NA> <NA> <NA> 2000
## Mean 1.5 <NA> <NA> <NA> 652
## Unique (excld. NA) 1 0 0 0 1498
## Missing values 0 2354 2354 2354 767
## Sorted TRUE <NA> <NA> <NA> FALSE
##
## wind wind.z MOL ustar rl air.pres
## Class numeric numeric logical logical logical logical
## Minimum 0.0751 2 <NA> <NA> <NA> <NA>
## Maximum 12.1 2 <NA> <NA> <NA> <NA>
## Mean 3.09 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1436 1 0 0 0 0
## Missing values 0 0 2354 2354 2354 2354
## Sorted FALSE TRUE <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc notes.int
## Class logical numeric logical logical logical character
## Minimum <NA> 0 <NA> <NA> <NA> .
## Maximum <NA> 0 <NA> <NA> <NA> .
## Mean <NA> 0 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 1
## Missing values 2354 0 2354 2354 2354 2353
## Sorted <NA> TRUE <NA> <NA> <NA> TRUE
##
## row.in.file.int j.type t.start.orig
## Class numeric character character
## Minimum 5 emission rate 1997-06-11T12:34:00Z
## Maximum 2360 emission rate 2021-11-12T13:55:00Z
## Mean 1180 <NA> <NA>
## Unique (excld. NA) 2354 1 1392
## Missing values 0 0 953
## Sorted FALSE TRUE FALSE
##
## t.end.orig j.NH3.unit.orig j.NH3.orig
## Class character character numeric
## Minimum 1997-06-11T12:34:00Z kg N/ha-hr 0
## Maximum 2021-11-12T13:55:00Z kg N/ha-hr 41.2
## Mean <NA> <NA> 0.969
## Unique (excld. NA) 1392 1 2166
## Missing values 953 0 0
## Sorted FALSE TRUE FALSE
##
## j.NH3.conv.fact dt.calc dt.diff ct mt cta
## Class numeric logical numeric numeric numeric numeric
## Minimum 1 <NA> <NA> 0.4 0.2 0.4
## Maximum 1 <NA> <NA> 100 86.2 100
## Mean 1 <NA> <NA> 26.7 21.7 26.7
## Unique (excld. NA) 1 0 0 1237 1497 1237
## Missing values 0 2354 2354 0 0 0
## Sorted TRUE <NA> <NA> FALSE FALSE FALSE
##
## bta flag.int rain.rate rain.cum wind.2m e.int e.cum
## Class numeric character numeric numeric numeric numeric numeric
## Minimum <NA> 0 0 0.0751 0 0
## Maximum <NA> 0 0 12.1 21.3 69.1
## Mean <NA> <NA> 0 0 3.09 1.53 8.97
## Unique (excld. NA) 0 1 1 1 1442 2159 2175
## Missing values 2354 0 0 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE FALSE FALSE FALSE
##
## e e.rel j.rel pub.info soil.type2 exper2 rep2
## Class numeric numeric numeric logical logical logical logical
## Minimum 0 0 0 <NA> <NA> <NA> <NA>
## Maximum 69.1 1 0.604 <NA> <NA> <NA> <NA>
## Mean 8.97 0.241 0.0266 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 2175 2112 2123 0 0 0 0
## Missing values 0 0 0 2354 2354 2354 2354
## Sorted FALSE FALSE FALSE <NA> <NA> <NA> <NA>
##
## acid meas.tech.orig meas.tech2 crop.orig
## Class logical character character character
## Minimum FALSE IHF micro met grass
## Maximum TRUE IHF micro met grass
## Mean 0.0254885301614274 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 2 1 1 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE
##
## man.source.orig app.method.orig app.method2 incorp.orig
## Class character character character character
## Minimum dairy Broadcast bc None
## Maximum pig Trailing shoe ts None
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 3 3 3 1
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE TRUE
##
## date.start first.row.int row.plot first.rows
## Class Date numeric numeric factor
## Minimum <NA> 5 5 Plots 10 Emis. 50
## Maximum <NA> 2350 298 Plots 99 Emis. 830
## Mean <NA> 1180 146 Plots 235 Emis. 1865
## Unique (excld. NA) 0 294 294 294
## Missing values 2354 0 0 0
## Sorted <NA> FALSE FALSE FALSE
##
## ggplotgroup
## Class factor
## Minimum (4.71,11]
## Maximum (292,298]
## Mean (143,149]
## Unique (excld. NA) 49
## Missing values 0
## Sorted FALSE
##