Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:53:39.061299"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| DiSAA-IT | Massimo Zilio, Fabrizio Adani | 2 | 2022-05-30 |
2. Contributors
| contributor | institute |
|---|---|
| Massimo Zilio | Gruppo Ricicla labs, DiSAA-Università degli Studi di Milano, Via Celoria 2, 20133 Milan, Italy |
| Fabrizio Adani | Gruppo Ricicla labs, DiSAA-Università degli Studi di Milano, Via Celoria 2, 20133 Milan, Italy |
3. File and directory names
## [1] "../../data-submitted/03/DiSSA-IT"## [1] "../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## Warning: 1 hour or longer delay after starting application
## bta = elapsed (cumulative) time since manure application *began*
## ct = elapsed time of measurements
## cta = elapsed time since application ended
## First 10 rows| row.in.file.int | app.start | t.start | bta | ct | cta |
|---|---|---|---|---|---|
| 5 | 2018-04-23 11:00:00 | 2018-04-23 17:00:00 | 6 | 6 | 12 |
| 6 | 2018-04-23 11:00:00 | 2018-04-23 23:00:00 | 12 | 13 | 19 |
| 7 | 2018-04-23 11:00:00 | 2018-04-24 06:00:00 | 19 | 19 | 25 |
| 8 | 2018-04-23 11:00:00 | 2018-04-24 12:00:00 | 25 | 30 | 36 |
| 9 | 2018-04-23 11:00:00 | 2018-04-24 23:00:00 | 36 | 43 | 49 |
| 10 | 2018-04-23 11:00:00 | 2018-04-25 12:00:00 | 49 | 49 | 55 |
| 11 | 2018-04-23 11:00:00 | 2018-04-25 18:00:00 | 55 | 54 | 60 |
| 12 | 2018-04-23 11:00:00 | 2018-04-25 23:00:00 | 60 | 73 | 79 |
| 13 | 2018-04-23 11:00:00 | 2018-04-26 18:00:00 | 79 | 78 | 84 |
| 32 | 2018-04-23 11:00:00 | 2018-04-23 17:00:00 | 6 | 6 | 12 |
Missing or double interval number
## OK
## OK
## OK
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| bLS | 54 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 54 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : No values to check.
## soil.temp.surf : No values to check.
## air.temp.z : No values to check.
## wind.z : OKManure and application
## man.stor : OK
## man.dm : Some values out of range
## [1] 10.3 100.0
## man.vs : OK
## man.tkn : OK
## man.tan : Some values out of range
## [1] 4.1 460.0
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : Some values out of range
## [1] 0.4 48.5
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## rep soil.water soil.water.v soil.dens man.source.det
## 54 54 54 54 54
## man.trt1 man.trt2 man.trt3 man.stor man.vs
## 27 27 54 27 27
## man.tkn man.tic man.ua man.vfa man.ph
## 27 54 54 54 27
## incorp time.incorp man.area dist.inj furrow.z
## 54 54 54 54 54
## furrow.w lai notes.plot bg.dl bg.val
## 54 54 36 54 54
## bg.unit pH.surf air.temp.z soil.temp soil.temp.z
## 54 54 54 54 54
## soil.temp.surf MOL ustar rl air.pres
## 54 54 54 54 54
## air.pres.unit notes.int soil.type2 exper2 rep2
## 54 53 54 54 54
## incorp.orig
## 54Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
10. dfsumm summary
Plot-level data
##
## 6 rows and 204 columns
## 6 unique rows
## pub.id
## Class character
## Minimum Zilio et al 2019
## Maximum Zilio et al 2019
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpmid
## Class character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2018.F:.P:Digestate.T:Digestate.R:NA.R2:.T:2018-04-23 11:00:00.M:bLSALPHA passive samplers plus Windtrax dispersion model
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2020.F:.P:Urea.T:Urea.R:NA.R2:.T:2020-05-28 11:00:00.M:bLSALPHA passive samplers plus Windtrax dispersion model
## Mean <NA>
## Unique (excld. NA) 6
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep plot.area
## Class character character character character logical numeric
## Minimum SYSTEMIC SYS 2018 Digestate <NA> 350
## Maximum SYSTEMIC SYS 2020 Urea <NA> 350
## Mean <NA> <NA> <NA> <NA> <NA> 350
## Unique (excld. NA) 1 3 1 2 0 1
## Missing values 0 0 0 0 6 0
## Sorted TRUE TRUE TRUE FALSE <NA> TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character numeric numeric numeric
## Minimum 45.3 9.11 IT Flat 12 39 46
## Maximum 45.3 9.11 IT Flat 12 43 49
## Mean 45.3 9.11 <NA> <NA> 12 41 47.5
## Unique (excld. NA) 1 1 1 1 1 2 2
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE FALSE FALSE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class numeric character logical logical character numeric
## Minimum 1.13 Loam <NA> <NA> Dry 7.05
## Maximum 1.23 Loam <NA> <NA> Dry 7.06
## Mean 1.18 <NA> <NA> <NA> <NA> 7.06
## Unique (excld. NA) 2 1 0 0 1 2
## Missing values 0 0 6 6 0 0
## Sorted FALSE TRUE <NA> <NA> TRUE FALSE
##
## soil.dens crop.res till man.source man.source.det
## Class logical character character character logical
## Minimum <NA> Yes No sewage sludge <NA>
## Maximum <NA> Yes No urea 46% <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 2 0
## Missing values 6 0 0 0 6
## Sorted <NA> TRUE TRUE FALSE <NA>
##
## man.bed man.con man.trt1 man.trt2
## Class character character character character
## Minimum None Slurry Anaerobic digestion Ammonia stripping
## Maximum None Solid Anaerobic digestion Ammonia stripping
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 2 1 1
## Missing values 0 0 3 3
## Sorted TRUE FALSE TRUE TRUE
##
## man.trt3 man.stor man.dm man.vs man.tkn man.tan man.tic
## Class logical numeric numeric numeric numeric numeric logical
## Minimum <NA> 50 10.3 4.04 7.7 4.1 <NA>
## Maximum <NA> 50 100 4.04 7.9 460 <NA>
## Mean <NA> 50 55.2 4.04 7.83 232 <NA>
## Unique (excld. NA) 0 1 3 1 2 4 0
## Missing values 6 3 0 3 3 0 6
## Sorted <NA> TRUE FALSE TRUE FALSE FALSE <NA>
##
## man.ua man.vfa man.ph app.start
## Class logical logical numeric POSIXct, POSIXt
## Minimum <NA> <NA> 8.4 2018-04-23 11:00:00
## Maximum <NA> <NA> 8.6 2020-05-28 11:00:00
## Mean <NA> <NA> 8.5 2019-05-03 03:00:00
## Unique (excld. NA) 0 0 3 3
## Missing values 6 6 3 0
## Sorted <NA> <NA> FALSE TRUE
##
## app.end app.method app.rate app.rate.unit
## Class POSIXct, POSIXt character numeric character
## Minimum 2018-04-23 12:00:00 bc 0.4 t/ha
## Maximum 2020-05-28 12:00:00 os 48.5 t/ha
## Mean 2019-05-03 04:00:00 <NA> 24.4 <NA>
## Unique (excld. NA) 3 2 2 1
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE TRUE
##
## incorp time.incorp man.area dist.inj furrow.z furrow.w
## Class character numeric logical logical logical logical
## Minimum <NA> <NA> <NA> <NA> <NA> <NA>
## Maximum <NA> <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 0 0 0
## Missing values 6 6 6 6 6 6
## Sorted <NA> <NA> <NA> <NA> <NA> <NA>
##
## crop crop.z crop.area lai
## Class character numeric numeric logical
## Minimum bare soil 0 0 <NA>
## Maximum bare soil 0 0 <NA>
## Mean <NA> 0 0 <NA>
## Unique (excld. NA) 1 1 1 0
## Missing values 0 0 0 6
## Sorted TRUE TRUE TRUE <NA>
##
## notes.plot
## Class character
## Minimum The plot for Digestate experiments is the same. We carried out measurements on the same plot in 3 consecutve years
## Maximum The plot for Urea experiments is the same. We carried out measurements on the same plot in 3 consecutve years
## Mean <NA>
## Unique (excld. NA) 2
## Missing values 4
## Sorted TRUE
##
## row.in.file.plot institute sub.period
## Class numeric character numeric
## Minimum 5 DiSAA-IT 3
## Maximum 10 DiSAA-IT 3
## Mean 7.5 <NA> 3
## Unique (excld. NA) 6 1 1
## Missing values 0 0 0
## Sorted FALSE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx
## Maximum ../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech
## Class character character
## Minimum Digestate bLS
## Maximum Urea bLS
## Mean <NA> <NA>
## Unique (excld. NA) 2 1
## Missing values 0 0
## Sorted FALSE TRUE
##
## meas.tech.det
## Class character
## Minimum ALPHA passive samplers plus Windtrax dispersion model
## Maximum ALPHA passive samplers plus Windtrax dispersion model
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 16-04-2019 11:00 16-04-2019 12:00
## Maximum 28-05-2020 11:00 28-05-2020 12:00
## Mean <NA> <NA>
## Unique (excld. NA) 3 3
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2018.F:.P:Digestate.T:Digestate.R:NA.R2:.T:2018-04-23 11:00:00
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2020.F:.P:Urea.T:Urea.R:NA.R2:.T:2020-05-28 11:00:00
## Mean <NA>
## Unique (excld. NA) 6
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.E:SYS 2018
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.E:SYS 2020
## Mean <NA> <NA>
## Unique (excld. NA) 3 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app e.1 e.4
## Class character numeric numeric numeric
## Minimum Massimo Zilio, Fabrizio Adani 184 <NA> <NA>
## Maximum Massimo Zilio, Fabrizio Adani 230 <NA> <NA>
## Mean <NA> 202 <NA> <NA>
## Unique (excld. NA) 1 4 0 0
## Missing values 0 0 6 6
## Sorted TRUE FALSE <NA> <NA>
##
## e.6 e.12 e.24 e.48 e.72 e.96 e.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0.334 3.38 14 15.2 <NA> <NA>
## Maximum 8.66 18.5 21.3 29.4 31.6 <NA> <NA>
## Mean 2.86 6.76 11.4 19.3 23.1 <NA> <NA>
## Unique (excld. NA) 6 6 6 6 6 0 0
## Missing values 0 0 0 0 0 6 6
## Sorted FALSE FALSE FALSE FALSE FALSE <NA> <NA>
##
## e.final e.tot e.cum.1 e.cum.4 e.cum.6 e.cum.12 e.cum.24
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 16 16 <NA> <NA> 0 0.334 3.38
## Maximum 31.8 31.8 <NA> <NA> 8.66 18.5 21.3
## Mean 23.5 23.5 <NA> <NA> 2.86 6.76 11.4
## Unique (excld. NA) 6 6 0 0 6 6 6
## Missing values 0 0 6 6 0 0 0
## Sorted FALSE FALSE <NA> <NA> FALSE FALSE FALSE
##
## e.cum.48 e.cum.72 e.cum.96 e.cum.168 e.cum.final e.cum.tot
## Class numeric numeric numeric numeric numeric numeric
## Minimum 14 15.2 <NA> <NA> 16 16
## Maximum 29.4 31.6 <NA> <NA> 31.8 31.8
## Mean 19.3 23.1 <NA> <NA> 23.5 23.5
## Unique (excld. NA) 6 6 0 0 6 6
## Missing values 0 0 6 6 0 0
## Sorted FALSE FALSE <NA> <NA> FALSE FALSE
##
## e.rel.1 e.rel.4 e.rel.6 e.rel.12 e.rel.24 e.rel.48 e.rel.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum <NA> <NA> 0 0.00182 0.0147 0.0667 0.0766
## Maximum <NA> <NA> 0.0377 0.0805 0.0926 0.128 0.152
## Mean <NA> <NA> 0.0137 0.0328 0.0568 0.0961 0.114
## Unique (excld. NA) 0 0 6 6 6 6 6
## Missing values 6 6 0 0 0 0 0
## Sorted <NA> <NA> FALSE FALSE FALSE FALSE FALSE
##
## e.rel.96 e.rel.168 e.rel.final e.rel.tot rain.1 rain.4
## Class numeric numeric numeric numeric numeric numeric
## Minimum <NA> <NA> 0.0804 0.0804 <NA> <NA>
## Maximum <NA> <NA> 0.154 0.154 <NA> <NA>
## Mean <NA> <NA> 0.117 0.117 <NA> <NA>
## Unique (excld. NA) 0 0 6 6 0 0
## Missing values 6 6 0 0 6 6
## Sorted <NA> <NA> FALSE FALSE <NA> <NA>
##
## rain.6 rain.12 rain.24 rain.48 rain.72 rain.96 rain.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 0 <NA> <NA>
## Maximum 0 0 0 0 0 <NA> <NA>
## Mean 0 0 0 0 0 <NA> <NA>
## Unique (excld. NA) 1 1 1 1 1 0 0
## Missing values 0 0 0 0 0 6 6
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> <NA>
##
## rain.final rain.tot air.temp.1 air.temp.4 air.temp.6
## Class numeric numeric numeric numeric numeric
## Minimum 0 0 <NA> <NA> 16.7
## Maximum 0 0 <NA> <NA> 23.7
## Mean 0 0 <NA> <NA> 20.7
## Unique (excld. NA) 1 1 0 0 3
## Missing values 0 0 6 6 0
## Sorted TRUE TRUE <NA> <NA> FALSE
##
## air.temp.12 air.temp.24 air.temp.48 air.temp.72 air.temp.96
## Class numeric numeric numeric numeric numeric
## Minimum 16.7 13.4 13.9 14.7 14.8
## Maximum 23.7 19.1 18.8 19.8 19.8
## Mean 20.7 16.9 17.1 17.8 17.9
## Unique (excld. NA) 3 3 3 3 3
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.168 air.temp.mn wind.1 wind.4 wind.6 wind.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 14.8 14.8 <NA> <NA> 1.27 1.27
## Maximum 19.8 19.8 <NA> <NA> 2.16 2.16
## Mean 17.9 17.9 <NA> <NA> 1.77 1.77
## Unique (excld. NA) 3 3 0 0 3 3
## Missing values 0 0 6 6 0 0
## Sorted FALSE FALSE <NA> <NA> FALSE FALSE
##
## wind.24 wind.48 wind.72 wind.96 wind.168 wind.mn wind.2m.1
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1.1 1.18 1.69 1.67 1.67 1.67 <NA>
## Maximum 4.78 3.3 3.24 2.78 2.78 2.78 <NA>
## Mean 2.44 2.02 2.38 2.18 2.18 2.18 <NA>
## Unique (excld. NA) 3 3 3 3 3 3 0
## Missing values 0 0 0 0 0 0 6
## Sorted FALSE FALSE TRUE TRUE TRUE TRUE <NA>
##
## wind.2m.4 wind.2m.6 wind.2m.12 wind.2m.24 wind.2m.48
## Class numeric numeric numeric numeric numeric
## Minimum <NA> 1.27 1.27 1.1 1.18
## Maximum <NA> 2.16 2.16 4.78 3.3
## Mean <NA> 1.77 1.77 2.44 2.02
## Unique (excld. NA) 0 3 3 3 3
## Missing values 6 0 0 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE
##
## wind.2m.72 wind.2m.96 wind.2m.168 wind.2m.mn rad.1 rad.4
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.69 1.67 1.67 1.67 <NA> <NA>
## Maximum 3.24 2.78 2.78 2.78 <NA> <NA>
## Mean 2.38 2.18 2.18 2.18 <NA> <NA>
## Unique (excld. NA) 3 3 3 3 0 0
## Missing values 0 0 0 0 6 6
## Sorted TRUE TRUE TRUE TRUE <NA> <NA>
##
## rad.6 rad.12 rad.24 rad.48 rad.72 rad.96 rad.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 55.5 55.5 164 196 225 241 241
## Maximum 452 452 416 320 328 303 303
## Mean 206 206 274 247 268 267 267
## Unique (excld. NA) 3 3 3 3 3 3 3
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE FALSE FALSE FALSE
##
## rad.mn rain.rate.1 rain.rate.4 rain.rate.6 rain.rate.12
## Class numeric numeric numeric numeric numeric
## Minimum 241 <NA> <NA> 0 0
## Maximum 303 <NA> <NA> 0 0
## Mean 267 <NA> <NA> 0 0
## Unique (excld. NA) 3 0 0 1 1
## Missing values 0 6 6 0 0
## Sorted FALSE <NA> <NA> TRUE TRUE
##
## rain.rate.24 rain.rate.48 rain.rate.72 rain.rate.96
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.168 rain.rate.mn rh.1 rh.4 rh.6 rh.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 0 <NA> <NA> 31.6 31.6
## Maximum 0 0 <NA> <NA> 48.1 48.1
## Mean 0 0 <NA> <NA> 39.5 39.5
## Unique (excld. NA) 1 1 0 0 3 3
## Missing values 0 0 6 6 0 0
## Sorted TRUE TRUE <NA> <NA> FALSE FALSE
##
## rh.24 rh.48 rh.72 rh.96 rh.168 rh.mn
## Class numeric numeric numeric numeric numeric numeric
## Minimum 48 48.7 48.4 48.8 48.8 48.8
## Maximum 62 63.2 61.3 61 61 61
## Mean 56.2 56.3 54.7 55.4 55.4 55.4
## Unique (excld. NA) 3 3 3 3 3 3
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## first.row.in.file.int last.row.in.file.int n.ints dt1
## Class numeric numeric integer numeric
## Minimum 5 13 9 6
## Maximum 50 58 9 6
## Mean 27.5 35.5 9 6
## Unique (excld. NA) 6 6 1 1
## Missing values 0 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## j.rel1 j.NH31 dt.min dt.max ct.min ct.max
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 0 5 13 6 78
## Maximum 0.00628 1.44 6 19 6 89
## Mean 0.00229 0.477 5.67 16.3 6 84.3
## Unique (excld. NA) 6 6 2 3 1 3
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE TRUE FALSE TRUE FALSE
##
## t.start.p t.end.p air.temp.z
## Class POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 2018-04-23 17:00:00 2018-04-26 18:00:00 <NA>
## Maximum 2020-05-28 17:00:00 2020-05-31 20:00:00 <NA>
## Mean 2019-05-03 08:40:00 2019-05-06 11:20:00 <NA>
## Unique (excld. NA) 3 3 0
## Missing values 0 0 6
## Sorted TRUE TRUE <NA>
##
## soil.temp.z wind.z wind.loc far.loc
## Class logical numeric character numeric
## Minimum <NA> 2 Nearest station 10000
## Maximum <NA> 2 Nearest station 10000
## Mean <NA> 2 <NA> 10000
## Unique (excld. NA) 0 1 1 1
## Missing values 6 0 0 0
## Sorted <NA> TRUE TRUE TRUE
##
## pub.info
## Class character
## Minimum Zilio, M. et al. (2020) ‘Evaluation of ammonia and odour emissions from animal slurry and digestate storage in the Po Valley (Italy)’, Waste Management. Elsevier Ltd, 103, pp. 296–304. doi: 10.1016/j.wasman.2019.12.038.
## Maximum Zilio, M. et al. (2020) ‘Evaluation of ammonia and odour emissions from animal slurry and digestate storage in the Po Valley (Italy)’, Waste Management. Elsevier Ltd, 103, pp. 296–304. doi: 10.1016/j.wasman.2019.12.038.
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE bLS micro met
## Maximum <NA> <NA> <NA> FALSE bLS micro met
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 6 6 6 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig app.method2
## Class character character character character
## Minimum Bare soil Sewage sludge Broadcast bc
## Maximum Bare soil Urea 46% Open slot injection os
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 2 2 2
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE
##
## incorp.orig date.start
## Class logical Date
## Minimum <NA> 2018-04-23
## Maximum <NA> 2020-05-28
## Mean <NA> <NA>
## Unique (excld. NA) 0 3
## Missing values 6 0
## Sorted <NA> TRUE
## Interval-level emission data
##
## 54 rows and 137 columns
## 54 unique rows
## cpmid
## Class character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2018.F:.P:Digestate.T:Digestate.R:NA.R2:.T:2018-04-23 11:00:00.M:bLSALPHA passive samplers plus Windtrax dispersion model
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2020.F:.P:Urea.T:Urea.R:NA.R2:.T:2020-05-28 11:00:00.M:bLSALPHA passive samplers plus Windtrax dispersion model
## Mean <NA>
## Unique (excld. NA) 6
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot
## Class character character character character character
## Minimum Zilio et al 2019 SYSTEMIC SYS 2018 Digestate
## Maximum Zilio et al 2019 SYSTEMIC SYS 2020 Urea
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 3 1 2
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE FALSE
##
## rep treat meas.tech
## Class logical character character
## Minimum <NA> Digestate bLS
## Maximum <NA> Urea bLS
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 0 2 1
## Missing values 54 0 0
## Sorted <NA> FALSE TRUE
##
## meas.tech.det
## Class character
## Minimum ALPHA passive samplers plus Windtrax dispersion model
## Maximum ALPHA passive samplers plus Windtrax dispersion model
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## plot.area lat long country topo clay
## Class numeric numeric numeric character character numeric
## Minimum 350 45.3 9.11 IT Flat 12
## Maximum 350 45.3 9.11 IT Flat 12
## Mean 350 45.3 9.11 <NA> <NA> 12
## Unique (excld. NA) 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## silt sand oc soil.type soil.water soil.water.v
## Class numeric numeric numeric character logical logical
## Minimum 39 46 1.13 Loam <NA> <NA>
## Maximum 43 49 1.23 Loam <NA> <NA>
## Mean 41 47.5 1.18 <NA> <NA> <NA>
## Unique (excld. NA) 2 2 2 1 0 0
## Missing values 0 0 0 0 54 54
## Sorted FALSE FALSE FALSE TRUE <NA> <NA>
##
## soil.moist soil.ph soil.dens crop.res till
## Class character numeric logical character character
## Minimum Dry 7.05 <NA> Yes No
## Maximum Dry 7.06 <NA> Yes No
## Mean <NA> 7.06 <NA> <NA> <NA>
## Unique (excld. NA) 1 2 0 1 1
## Missing values 0 0 54 0 0
## Sorted TRUE FALSE <NA> TRUE TRUE
##
## man.source man.source.det man.bed man.con
## Class character logical character character
## Minimum sewage sludge <NA> None Slurry
## Maximum urea 46% <NA> None Solid
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 2 0 1 2
## Missing values 0 54 0 0
## Sorted FALSE <NA> TRUE FALSE
##
## man.trt1 man.trt2 man.trt3 man.stor
## Class character character logical numeric
## Minimum Anaerobic digestion Ammonia stripping <NA> 50
## Maximum Anaerobic digestion Ammonia stripping <NA> 50
## Mean <NA> <NA> <NA> 50
## Unique (excld. NA) 1 1 0 1
## Missing values 27 27 54 27
## Sorted TRUE TRUE <NA> TRUE
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric numeric numeric numeric logical logical logical
## Minimum 10.3 4.04 7.7 4.1 <NA> <NA> <NA>
## Maximum 100 4.04 7.9 460 <NA> <NA> <NA>
## Mean 55.2 4.04 7.83 232 <NA> <NA> <NA>
## Unique (excld. NA) 3 1 2 4 0 0 0
## Missing values 0 27 27 0 54 54 54
## Sorted FALSE TRUE FALSE FALSE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 8.4 2018-04-23 11:00:00 2018-04-23 12:00:00 bc
## Maximum 8.6 2020-05-28 11:00:00 2020-05-28 12:00:00 os
## Mean 8.5 2019-05-03 03:00:00 2019-05-03 04:00:00 <NA>
## Unique (excld. NA) 3 3 3 2
## Missing values 27 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 0.4 t/ha <NA> <NA> <NA>
## Maximum 48.5 t/ha <NA> <NA> <NA>
## Mean 24.4 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 2 1 0 0 0
## Missing values 0 0 54 54 54
## Sorted FALSE TRUE <NA> <NA> <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical logical logical character numeric numeric
## Minimum <NA> <NA> <NA> bare soil 0 0
## Maximum <NA> <NA> <NA> bare soil 0 0
## Mean <NA> <NA> <NA> <NA> 0 0
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 54 54 54 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## lai
## Class logical
## Minimum <NA>
## Maximum <NA>
## Mean <NA>
## Unique (excld. NA) 0
## Missing values 54
## Sorted <NA>
##
## notes.plot
## Class character
## Minimum The plot for Digestate experiments is the same. We carried out measurements on the same plot in 3 consecutve years
## Maximum The plot for Urea experiments is the same. We carried out measurements on the same plot in 3 consecutve years
## Mean <NA>
## Unique (excld. NA) 2
## Missing values 36
## Sorted TRUE
##
## row.in.file.plot institute sub.period
## Class numeric character numeric
## Minimum 5 DiSAA-IT 3
## Maximum 10 DiSAA-IT 3
## Mean 7.5 <NA> 3
## Unique (excld. NA) 6 1 1
## Missing values 0 0 0
## Sorted FALSE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx
## Maximum ../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 16-04-2019 11:00 16-04-2019 12:00
## Maximum 28-05-2020 11:00 28-05-2020 12:00
## Mean <NA> <NA>
## Unique (excld. NA) 3 3
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2018.F:.P:Digestate.T:Digestate.R:NA.R2:.T:2018-04-23 11:00:00
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.F:../../data-submitted/03/DiSSA-IT/ALFAM2_data from Adani-Zilio_2.xlsx.E:SYS 2020.F:.P:Urea.T:Urea.R:NA.R2:.T:2020-05-28 11:00:00
## Mean <NA>
## Unique (excld. NA) 6
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:DiSAA-IT.Pr:SYSTEMIC.E:SYS 2018
## Maximum D:1.I:DiSAA-IT.Pr:SYSTEMIC.E:SYS 2020
## Mean <NA> <NA>
## Unique (excld. NA) 3 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app interval
## Class character numeric numeric
## Minimum Massimo Zilio, Fabrizio Adani 184 1
## Maximum Massimo Zilio, Fabrizio Adani 230 9
## Mean <NA> 202 5
## Unique (excld. NA) 1 4 9
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## t.start t.end dt bg.dl
## Class POSIXct, POSIXt POSIXct, POSIXt numeric logical
## Minimum 2018-04-23 17:00:00 2018-04-23 23:00:00 5 <NA>
## Maximum 2020-05-31 20:00:00 2020-06-01 07:00:00 19 <NA>
## Mean 2019-05-04 17:57:46 2019-05-05 03:20:00 9.37 <NA>
## Unique (excld. NA) 27 27 10 0
## Missing values 0 0 0 54
## Sorted FALSE FALSE FALSE <NA>
##
## bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class logical logical numeric character logical numeric
## Minimum <NA> <NA> 0 kg N/ha-hr <NA> 9.84
## Maximum <NA> <NA> 1.64 kg N/ha-hr <NA> 24.9
## Mean <NA> <NA> 0.312 <NA> <NA> 18.4
## Unique (excld. NA) 0 0 49 1 0 27
## Missing values 54 54 0 0 54 0
## Sorted <NA> <NA> FALSE TRUE <NA> FALSE
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical logical numeric
## Minimum <NA> <NA> <NA> <NA> 0.714
## Maximum <NA> <NA> <NA> <NA> 811
## Mean <NA> <NA> <NA> <NA> 283
## Unique (excld. NA) 0 0 0 0 27
## Missing values 54 54 54 54 0
## Sorted <NA> <NA> <NA> <NA> FALSE
##
## wind wind.z MOL ustar rl air.pres
## Class numeric numeric logical logical logical logical
## Minimum 0.531 2 <NA> <NA> <NA> <NA>
## Maximum 5.78 2 <NA> <NA> <NA> <NA>
## Mean 2.17 2 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 26 1 0 0 0 0
## Missing values 0 0 54 54 54 54
## Sorted FALSE TRUE <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc
## Class logical numeric numeric character numeric
## Minimum <NA> 0 30.9 Nearest station 10000
## Maximum <NA> 0 77.5 Nearest station 10000
## Mean <NA> 0 52.7 <NA> 10000
## Unique (excld. NA) 0 1 27 1 1
## Missing values 54 0 0 0 0
## Sorted <NA> TRUE FALSE TRUE TRUE
##
## notes.int row.in.file.int j.type t.start.orig
## Class character numeric character character
## Minimum . 5 emission rate 16-04-2019 16:00
## Maximum . 58 emission rate 31-05-2020 20:00
## Mean <NA> 31.5 <NA> <NA>
## Unique (excld. NA) 1 54 1 27
## Missing values 53 0 0 0
## Sorted TRUE FALSE TRUE FALSE
##
## t.end.orig j.NH3.unit.orig j.NH3.orig j.NH3.conv.fact
## Class character character numeric numeric
## Minimum 16-04-2019 16:00 kg N/ha-hr 0 1
## Maximum 31-05-2020 20:00 kg N/ha-hr 1.64 1
## Mean <NA> <NA> 0.312 1
## Unique (excld. NA) 27 1 49 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE FALSE TRUE
##
## dt.calc dt.diff ct mt cta bta flag.int
## Class numeric numeric numeric numeric numeric numeric character
## Minimum 5 0 6 3 11 5
## Maximum 19 0 89 82.5 94 81
## Mean 9.37 0 42.7 38 48.3 39 <NA>
## Unique (excld. NA) 10 1 24 23 24 23 1
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE TRUE FALSE FALSE FALSE FALSE TRUE
##
## rain.rate rain.cum wind.2m e.int e.cum e e.rel
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0.531 0 0 0 0
## Maximum 0 0 5.78 11.5 31.8 31.8 0.154
## Mean 0 0 2.17 2.61 15.7 15.7 0.0779
## Unique (excld. NA) 1 1 26 49 51 51 51
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE FALSE FALSE FALSE
##
## j.rel
## Class numeric
## Minimum 0
## Maximum 0.00713
## Mean 0.00155
## Unique (excld. NA) 49
## Missing values 0
## Sorted FALSE
##
## pub.info
## Class character
## Minimum Zilio, M. et al. (2020) ‘Evaluation of ammonia and odour emissions from animal slurry and digestate storage in the Po Valley (Italy)’, Waste Management. Elsevier Ltd, 103, pp. 296–304. doi: 10.1016/j.wasman.2019.12.038.
## Maximum Zilio, M. et al. (2020) ‘Evaluation of ammonia and odour emissions from animal slurry and digestate storage in the Po Valley (Italy)’, Waste Management. Elsevier Ltd, 103, pp. 296–304. doi: 10.1016/j.wasman.2019.12.038.
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE bLS micro met
## Maximum <NA> <NA> <NA> FALSE bLS micro met
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 54 54 54 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig app.method2
## Class character character character character
## Minimum Bare soil Sewage sludge Broadcast bc
## Maximum Bare soil Urea 46% Open slot injection os
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 2 2 2
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE
##
## incorp.orig date.start first.row.int row.plot
## Class logical Date numeric numeric
## Minimum <NA> 2018-04-23 5 5
## Maximum <NA> 2018-04-23 50 10
## Mean <NA> <NA> 27.5 7.5
## Unique (excld. NA) 0 1 6 6
## Missing values 54 0 0 0
## Sorted <NA> TRUE FALSE FALSE
##
## first.rows ggplotgroup
## Class factor numeric
## Minimum Plots 10 Emis. 50 1
## Maximum Plots 9 Emis. 41 1
## Mean Plots 7 Emis. 23 1
## Unique (excld. NA) 6 1
## Missing values 0 0
## Sorted FALSE TRUE
##