Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:51:15.119764"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU | Pedersen, Johanna | 1 | 230726 |
2. Contributors
| contributor | institute |
|---|---|
| Lemes, Yolanda Maria | Aarhus University |
| Nyord, Tavs | Aarhus University |
| Feilberg, Anders | Aarhus University |
| Hafner, Sasha | Aarhus University |
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## bta (cum. time since application began) is not available.Missing or double interval number
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMissing time between intervals
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."Measurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| Wind tunnel | 1503 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| wt | 1503 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : No values to check.
## soil.temp : No values to check.
## soil.temp.surf : No values to check.
## air.temp.z : No values to check.
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : OK
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## meas.tech.det silt sand oc soil.type
## 1503 1503 1503 1503 1503
## soil.water.v soil.moist man.source.det man.bed man.trt2
## 1503 1503 1503 1503 1503
## man.trt3 man.stor man.vs man.tic man.ua
## 1503 1503 1503 1503 1503
## time.incorp man.area dist.inj furrow.z furrow.w
## 1503 1503 1503 1503 1503
## crop.area lai notes.plot t.start t.end
## 1503 1503 1414 1503 1503
## bg.dl pH.surf air.temp air.temp.z soil.temp
## 1503 1503 1503 1503 1503
## soil.temp.z soil.temp.surf rad MOL ustar
## 1503 1503 1503 1503 1503
## rl air.pres air.pres.unit rh wind.loc
## 1503 1503 1503 1503 1503
## far.loc notes.int t.start.orig t.end.orig dt.calc
## 1503 1502 1503 1503 1503
## dt.diff bta soil.type2 exper2 rep2
## 1503 1503 1503 1503 1503
## date.start
## 1503Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
10. dfsumm summary
Plot-level data
##
## 18 rows and 174 columns
## 18 unique rows
## pub.id
## Class character
## Minimum a
## Maximum a
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18E.F:Semi-field.P:1.T:D-CM.R:1.R2:.T:2018-05-01 13:08:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18F.F:Semi-field.P:9.T:D-CM.R:3.R2:.T:2018-05-08 12:36:00.M:Wind tunnelNA
## Mean <NA>
## Unique (excld. NA) 18
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep plot.area
## Class character character character numeric numeric numeric
## Minimum NUGA 18E Semi-field 1 1 0.2
## Maximum NUGA 18F Semi-field 9 3 0.2
## Mean <NA> <NA> <NA> 5 2 0.2
## Unique (excld. NA) 1 2 1 9 3 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE FALSE TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character numeric logical logical
## Minimum 56.5 9.58 DK Flat 4 <NA> <NA>
## Maximum 56.5 9.58 DK Flat 4 <NA> <NA>
## Mean 56.5 9.58 <NA> <NA> 4 <NA> <NA>
## Unique (excld. NA) 1 1 1 1 1 0 0
## Missing values 0 0 0 0 0 18 18
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical logical numeric logical logical numeric
## Minimum <NA> <NA> 0.09 <NA> <NA> 4.6
## Maximum <NA> <NA> 0.09 <NA> <NA> 4.6
## Mean <NA> <NA> 0.09 <NA> <NA> 4.6
## Unique (excld. NA) 0 0 1 0 0 1
## Missing values 18 18 0 18 18 0
## Sorted <NA> <NA> TRUE <NA> <NA> TRUE
##
## soil.dens crop.res till man.source man.source.det
## Class numeric character character character logical
## Minimum 1.4 Yes No cat <NA>
## Maximum 1.4 Yes No cat <NA>
## Mean 1.4 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 18
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 18 0 0 18 18
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 5.7 <NA> 2.5 1.3 <NA> <NA>
## Maximum <NA> 8.53 <NA> 4.2 2.6 <NA> <NA>
## Mean <NA> 6.84 <NA> 3.63 1.97 <NA> <NA>
## Unique (excld. NA) 0 3 0 2 3 0 0
## Missing values 18 0 18 0 0 18 18
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 0.15 7.13 2018-05-01 13:08:00 2018-05-01 13:08:00
## Maximum 12 7.73 2018-05-08 12:36:00 2018-05-08 12:36:00
## Mean 4.5 7.36 2018-05-05 00:50:40 2018-05-05 00:50:40
## Unique (excld. NA) 3 3 18 18
## Missing values 0 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 50 t/ha none <NA>
## Maximum bsth 50 t/ha none <NA>
## Mean <NA> 50 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 18
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class logical logical logical logical character numeric
## Minimum <NA> <NA> <NA> <NA> cereal 21
## Maximum <NA> <NA> <NA> <NA> cereal 25
## Mean <NA> <NA> <NA> <NA> <NA> 23
## Unique (excld. NA) 0 0 0 0 1 2
## Missing values 18 18 18 18 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 22 AU
## Mean <NA> <NA> <NA> 13.5 <NA>
## Unique (excld. NA) 0 0 1 18 1
## Missing values 18 18 17 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det app.start.orig
## Class character character logical character
## Minimum D-CM Wind tunnel <NA> 01-05-2018 13:08
## Maximum U-CM Wind tunnel <NA> 08-05-2018 12:36
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 3 1 0 18
## Missing values 0 0 18 0
## Sorted FALSE TRUE <NA> TRUE
##
## app.end.orig
## Class character
## Minimum 01-05-2018 13:08
## Maximum 08-05-2018 12:36
## Mean <NA>
## Unique (excld. NA) 18
## Missing values 0
## Sorted TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18E.F:Semi-field.P:1.T:D-CM.R:1.R2:.T:2018-05-01 13:08:00
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18F.F:Semi-field.P:9.T:D-CM.R:3.R2:.T:2018-05-08 12:36:00
## Mean <NA>
## Unique (excld. NA) 18
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU.Pr:NUGA.E:18E Pedersen, Johanna 65
## Maximum D:1.I:AU.Pr:NUGA.E:18F Pedersen, Johanna 130
## Mean <NA> <NA> <NA> 98.3
## Unique (excld. NA) 2 1 1 3
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE
##
## e.1 e.4 e.6 e.12 e.24 e.48 e.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum <NA> 0.221 0.423 1.04 1.85 3.42 4.06
## Maximum <NA> 5.75 8.54 15 22.6 40.7 47.4
## Mean <NA> 2.84 4.45 8.26 13 19.9 22.1
## Unique (excld. NA) 0 18 18 18 18 18 18
## Missing values 18 0 0 0 0 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.96 e.168 e.final e.tot e.cum.1 e.cum.4 e.cum.6
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 4.62 <NA> 5.77 5.77 <NA> 0.221 0.423
## Maximum 52.3 <NA> 59.6 59.6 <NA> 5.75 8.54
## Mean 23.6 <NA> 26.1 26.1 <NA> 2.84 4.45
## Unique (excld. NA) 18 0 18 18 0 18 18
## Missing values 0 18 0 0 18 0 0
## Sorted FALSE <NA> FALSE FALSE <NA> FALSE FALSE
##
## e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96 e.cum.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.04 1.85 3.42 4.06 4.62 <NA>
## Maximum 15 22.6 40.7 47.4 52.3 <NA>
## Mean 8.26 13 19.9 22.1 23.6 <NA>
## Unique (excld. NA) 18 18 18 18 18 0
## Missing values 0 0 0 0 0 18
## Sorted FALSE FALSE FALSE FALSE FALSE <NA>
##
## e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6 e.rel.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 5.77 5.77 <NA> 0.0034 0.00651 0.016
## Maximum 59.6 59.6 <NA> 0.0442 0.0657 0.119
## Mean 26.1 26.1 <NA> 0.0275 0.0433 0.0807
## Unique (excld. NA) 18 18 0 18 18 18
## Missing values 0 0 18 0 0 0
## Sorted FALSE FALSE <NA> FALSE FALSE FALSE
##
## e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168 e.rel.final
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.0284 0.0525 0.0624 0.0711 <NA> 0.0888
## Maximum 0.208 0.39 0.437 0.469 <NA> 0.524
## Mean 0.126 0.191 0.211 0.225 <NA> 0.249
## Unique (excld. NA) 18 18 18 18 0 18
## Missing values 0 0 0 0 18 0
## Sorted FALSE FALSE FALSE FALSE <NA> FALSE
##
## e.rel.tot rain.1 rain.4 rain.6 rain.12 rain.24 rain.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.0888 <NA> 0 0 0 0 0
## Maximum 0.524 <NA> 0 0 0 0 0
## Mean 0.249 <NA> 0 0 0 0 0
## Unique (excld. NA) 18 0 1 1 1 1 1
## Missing values 0 18 0 0 0 0 0
## Sorted FALSE <NA> TRUE TRUE TRUE TRUE TRUE
##
## rain.72 rain.96 rain.168 rain.final rain.tot wind.1 wind.4
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 <NA> 0 0 <NA> 0.33
## Maximum 0 0 <NA> 0 0 <NA> 0.33
## Mean 0 0 <NA> 0 0 <NA> 0.33
## Unique (excld. NA) 1 1 0 1 1 0 1
## Missing values 0 0 18 0 0 18 0
## Sorted TRUE TRUE <NA> TRUE TRUE <NA> TRUE
##
## wind.6 wind.12 wind.24 wind.48 wind.72 wind.96 wind.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.33 0.33 0.33 0.33 0.33 0.33 0.33
## Maximum 0.33 0.33 0.33 0.33 0.33 0.33 0.33
## Mean 0.33 0.33 0.33 0.33 0.33 0.33 0.33
## Unique (excld. NA) 1 2 1 1 1 1 2
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE FALSE TRUE TRUE TRUE TRUE FALSE
##
## wind.mn wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12 wind.2m.24
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.33 <NA> 0.607 0.607 0.607 0.607
## Maximum 0.33 <NA> 0.628 0.628 0.628 0.628
## Mean 0.33 <NA> 0.618 0.618 0.618 0.618
## Unique (excld. NA) 2 0 2 2 2 2
## Missing values 0 18 0 0 0 0
## Sorted FALSE <NA> TRUE TRUE TRUE TRUE
##
## wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168 wind.2m.mn
## Class numeric numeric numeric numeric numeric
## Minimum 0.607 0.607 0.607 0.607 0.607
## Maximum 0.628 0.628 0.628 0.628 0.628
## Mean 0.618 0.618 0.618 0.618 0.618
## Unique (excld. NA) 2 2 2 2 2
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## rain.rate.1 rain.rate.4 rain.rate.6 rain.rate.12
## Class numeric numeric numeric numeric
## Minimum <NA> 0 0 0
## Maximum <NA> 0 0 0
## Mean <NA> 0 0 0
## Unique (excld. NA) 0 1 1 1
## Missing values 18 0 0 0
## Sorted <NA> TRUE TRUE TRUE
##
## rain.rate.24 rain.rate.48 rain.rate.72 rain.rate.96
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.168 rain.rate.mn first.row.in.file.int
## Class numeric numeric numeric
## Minimum 0 0 5
## Maximum 0 0 1430
## Mean 0 0 740
## Unique (excld. NA) 1 1 18
## Missing values 0 0 0
## Sorted TRUE TRUE FALSE
##
## last.row.in.file.int n.ints dt1 j.rel1 j.NH31
## Class numeric integer numeric numeric numeric
## Minimum 93 78 1.58 -0.000376 -0.0376
## Maximum 1510 89 1.82 0.0105 1.37
## Mean 822 83.5 1.7 0.00467 0.499
## Unique (excld. NA) 18 2 2 17 17
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE TRUE FALSE FALSE
##
## dt.min dt.max ct.min ct.max t.start.p
## Class numeric numeric numeric numeric POSIXct, POSIXt
## Minimum 1.58 1.58 1.58 141 <NA>
## Maximum 1.82 1.82 1.82 142 <NA>
## Mean 1.7 1.7 1.7 141 <NA>
## Unique (excld. NA) 2 2 2 2 0
## Missing values 0 0 0 0 18
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## t.end.p air.temp.z soil.temp.z wind.z wind.loc
## Class POSIXct, POSIXt numeric logical numeric logical
## Minimum <NA> <NA> <NA> 0.25 <NA>
## Maximum <NA> <NA> <NA> 0.25 <NA>
## Mean <NA> <NA> <NA> 0.25 <NA>
## Unique (excld. NA) 0 0 0 1 0
## Missing values 18 18 18 0 18
## Sorted <NA> <NA> <NA> TRUE <NA>
##
## far.loc
## Class logical
## Minimum <NA>
## Maximum <NA>
## Mean <NA>
## Unique (excld. NA) 0
## Missing values 18
## Sorted <NA>
##
## pub.info
## Class character
## Minimum Lemes, Y. M., Nyord, T., Feilberg, A., Hafner, S. D., Pedersen, J. 2023. Effect of anaerobic digestion on odor and ammonia emission from land-applied cattle manure. Journal of Environmental Management 338, 117815. 10.1016/j.jenvman.2023.117815
## Maximum Lemes, Y. M., Nyord, T., Feilberg, A., Hafner, S. D., Pedersen, J. 2023. Effect of anaerobic digestion on odor and ammonia emission from land-applied cattle manure. Journal of Environmental Management 338, 117815. 10.1016/j.jenvman.2023.117815
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE Wind tunnel wt
## Maximum <NA> <NA> <NA> FALSE Wind tunnel wt
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 18 18 18 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig
## Class character character character
## Minimum Cereal Cattle Band spread or trailing hose
## Maximum Cereal Cattle Band spread or trailing hose
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## app.method2 incorp.orig date.start
## Class character character Date
## Minimum bsth None <NA>
## Maximum bsth None <NA>
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0
## Missing values 0 0 18
## Sorted TRUE TRUE <NA>
## Interval-level emission data
##
## 1503 rows and 137 columns
## 1503 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18E.F:Semi-field.P:1.T:D-CM.R:1.R2:.T:2018-05-01 13:08:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18F.F:Semi-field.P:9.T:D-CM.R:3.R2:.T:2018-05-08 12:36:00.M:Wind tunnelNA
## Mean <NA>
## Unique (excld. NA) 18
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class character character character character numeric numeric
## Minimum a NUGA 18E Semi-field 1 1
## Maximum a NUGA 18F Semi-field 9 3
## Mean <NA> <NA> <NA> <NA> 5 2
## Unique (excld. NA) 1 1 2 1 9 3
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE FALSE FALSE
##
## treat meas.tech meas.tech.det plot.area lat
## Class character character logical numeric numeric
## Minimum D-CM Wind tunnel <NA> 0.2 56.5
## Maximum U-CM Wind tunnel <NA> 0.2 56.5
## Mean <NA> <NA> <NA> 0.2 56.5
## Unique (excld. NA) 3 1 0 1 1
## Missing values 0 0 1503 0 0
## Sorted FALSE TRUE <NA> TRUE TRUE
##
## long country topo clay silt sand oc
## Class numeric character character numeric logical logical logical
## Minimum 9.58 DK Flat 4 <NA> <NA> <NA>
## Maximum 9.58 DK Flat 4 <NA> <NA> <NA>
## Mean 9.58 <NA> <NA> 4 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0 0 0
## Missing values 0 0 0 0 1503 1503 1503
## Sorted TRUE TRUE TRUE TRUE <NA> <NA> <NA>
##
## soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical numeric logical logical numeric
## Minimum <NA> 0.09 <NA> <NA> 4.6
## Maximum <NA> 0.09 <NA> <NA> 4.6
## Mean <NA> 0.09 <NA> <NA> 4.6
## Unique (excld. NA) 0 1 0 0 1
## Missing values 1503 0 1503 1503 0
## Sorted <NA> TRUE <NA> <NA> TRUE
##
## soil.dens crop.res till man.source man.source.det
## Class numeric character character character logical
## Minimum 1.4 Yes No cat <NA>
## Maximum 1.4 Yes No cat <NA>
## Mean 1.4 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 1503
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 1503 0 0 1503 1503
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 5.7 <NA> 2.5 1.3 <NA> <NA>
## Maximum <NA> 8.53 <NA> 4.2 2.6 <NA> <NA>
## Mean <NA> 6.84 <NA> 3.63 1.97 <NA> <NA>
## Unique (excld. NA) 0 3 0 2 3 0 0
## Missing values 1503 0 1503 0 0 1503 1503
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 0.15 7.13 2018-05-01 13:08:00 2018-05-01 13:08:00
## Maximum 12 7.73 2018-05-08 12:36:00 2018-05-08 12:36:00
## Mean 4.5 7.36 2018-05-04 19:22:38 2018-05-04 19:22:38
## Unique (excld. NA) 3 3 18 18
## Missing values 0 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 50 t/ha none <NA>
## Maximum bsth 50 t/ha none <NA>
## Mean <NA> 50 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 1503
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class logical logical logical logical character numeric
## Minimum <NA> <NA> <NA> <NA> cereal 21
## Maximum <NA> <NA> <NA> <NA> cereal 25
## Mean <NA> <NA> <NA> <NA> <NA> 22.9
## Unique (excld. NA) 0 0 0 0 1 2
## Missing values 1503 1503 1503 1503 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 22 AU
## Mean <NA> <NA> <NA> 13.2 <NA>
## Unique (excld. NA) 0 0 1 18 1
## Missing values 1503 1503 1414 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 01-05-2018 13:08 01-05-2018 13:08
## Maximum 08-05-2018 12:36 08-05-2018 12:36
## Mean <NA> <NA>
## Unique (excld. NA) 18 18
## Missing values 0 0
## Sorted TRUE TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18E.F:Semi-field.P:1.T:D-CM.R:1.R2:.T:2018-05-01 13:08:00
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_6_1_230726_JP_18EF.xlsx.E:18F.F:Semi-field.P:9.T:D-CM.R:3.R2:.T:2018-05-08 12:36:00
## Mean <NA>
## Unique (excld. NA) 18
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU.Pr:NUGA.E:18E Pedersen, Johanna 65
## Maximum D:1.I:AU.Pr:NUGA.E:18F Pedersen, Johanna 130
## Mean <NA> <NA> <NA> 98.3
## Unique (excld. NA) 2 1 1 3
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE
##
## interval t.start t.end dt bg.dl
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric logical
## Minimum 1 <NA> <NA> 1.58 <NA>
## Maximum 89 <NA> <NA> 1.82 <NA>
## Mean 42.4 <NA> <NA> 1.69 <NA>
## Unique (excld. NA) 89 0 0 2 0
## Missing values 0 1503 1503 0 1503
## Sorted FALSE <NA> <NA> TRUE <NA>
##
## bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class numeric character numeric character logical logical
## Minimum 0.011 ppm -0.0376 kg N/ha-hr <NA> <NA>
## Maximum 0.037 ppm 1.57 kg N/ha-hr <NA> <NA>
## Mean 0.0199 <NA> 0.187 <NA> <NA> <NA>
## Unique (excld. NA) 167 1 1502 1 0 0
## Missing values 0 0 0 0 1503 1503
## Sorted FALSE TRUE FALSE TRUE <NA> <NA>
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical logical logical
## Minimum <NA> <NA> <NA> <NA> <NA>
## Maximum <NA> <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 0 0
## Missing values 1503 1503 1503 1503 1503
## Sorted <NA> <NA> <NA> <NA> <NA>
##
## wind wind.z MOL ustar rl air.pres
## Class numeric numeric logical logical logical logical
## Minimum 0.33 0.25 <NA> <NA> <NA> <NA>
## Maximum 0.33 0.25 <NA> <NA> <NA> <NA>
## Mean 0.33 0.25 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0 0
## Missing values 0 0 1503 1503 1503 1503
## Sorted TRUE TRUE <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc notes.int
## Class logical numeric logical logical logical character
## Minimum <NA> 0 <NA> <NA> <NA> .
## Maximum <NA> 0 <NA> <NA> <NA> .
## Mean <NA> 0 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 1
## Missing values 1503 0 1503 1503 1503 1502
## Sorted <NA> TRUE <NA> <NA> <NA> TRUE
##
## row.in.file.int j.type t.start.orig t.end.orig
## Class numeric character logical logical
## Minimum 5 emission rate <NA> <NA>
## Maximum 1510 emission rate <NA> <NA>
## Mean 756 <NA> <NA> <NA>
## Unique (excld. NA) 1503 1 0 0
## Missing values 0 0 1503 1503
## Sorted FALSE TRUE <NA> <NA>
##
## j.NH3.unit.orig j.NH3.orig j.NH3.conv.fact dt.calc dt.diff
## Class character numeric numeric logical numeric
## Minimum kg N/ha-hr -0.0376 1 <NA> <NA>
## Maximum kg N/ha-hr 1.57 1 <NA> <NA>
## Mean <NA> 0.187 1 <NA> <NA>
## Unique (excld. NA) 1 1502 1 0 0
## Missing values 0 0 0 1503 1503
## Sorted TRUE FALSE TRUE <NA> <NA>
##
## ct mt cta bta flag.int rain.rate rain.cum
## Class numeric numeric numeric numeric character numeric numeric
## Minimum 1.58 0.79 1.58 <NA> 0 0
## Maximum 142 141 142 <NA> 0 0
## Mean 71.5 70.6 71.5 <NA> <NA> 0 0
## Unique (excld. NA) 167 166 167 0 1 1 1
## Missing values 0 0 0 1503 0 0 0
## Sorted FALSE FALSE FALSE <NA> TRUE TRUE TRUE
##
## wind.2m e.int e.cum e e.rel j.rel
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.607 -0.0594 -0.0594 -0.0594 -0.000594 -0.000376
## Maximum 0.628 2.8 59.6 59.6 0.524 0.0144
## Mean 0.617 0.313 20 20 0.191 0.00178
## Unique (excld. NA) 2 1502 1502 1502 1502 1502
## Missing values 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE FALSE FALSE
##
## pub.info
## Class character
## Minimum Lemes, Y. M., Nyord, T., Feilberg, A., Hafner, S. D., Pedersen, J. 2023. Effect of anaerobic digestion on odor and ammonia emission from land-applied cattle manure. Journal of Environmental Management 338, 117815. 10.1016/j.jenvman.2023.117815
## Maximum Lemes, Y. M., Nyord, T., Feilberg, A., Hafner, S. D., Pedersen, J. 2023. Effect of anaerobic digestion on odor and ammonia emission from land-applied cattle manure. Journal of Environmental Management 338, 117815. 10.1016/j.jenvman.2023.117815
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE Wind tunnel wt
## Maximum <NA> <NA> <NA> FALSE Wind tunnel wt
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 1503 1503 1503 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig
## Class character character character
## Minimum Cereal Cattle Band spread or trailing hose
## Maximum Cereal Cattle Band spread or trailing hose
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## app.method2 incorp.orig date.start first.row.int row.plot
## Class character character Date numeric numeric
## Minimum bsth None <NA> 5 5
## Maximum bsth None <NA> 1430 22
## Mean <NA> <NA> <NA> 715 13.2
## Unique (excld. NA) 1 1 0 18 18
## Missing values 0 0 1503 0 0
## Sorted TRUE TRUE <NA> FALSE TRUE
##
## first.rows ggplotgroup
## Class factor factor
## Minimum Plots 10 Emis. 628 (4.98,10.7]
## Maximum Plots 9 Emis. 361 (16.3,22]
## Mean Plots 19 Emis. 884 (10.7,16.3]
## Unique (excld. NA) 18 3
## Missing values 0 0
## Sorted FALSE TRUE
##