Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:48:05.114064"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU | Pedersen, Johanna | 1 | 2021-10-13 |
2. Contributors
| contributor | institute |
|---|---|
| Shabtai Bittman | Agassiz Research and Development Center, BC, Canada |
| Derek Hunt | Agassiz Research and Development Center, BC, Canada |
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## OKMissing or double interval number
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| Wind tunnel | 576 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| wt | 576 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : OK
## soil.temp.surf : No values to check.
## air.temp.z : OK
## wind.z : No values to check.Manure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## meas.tech.det clay silt sand oc
## 576 576 576 576 576
## soil.water.v soil.moist man.source.det man.bed man.trt2
## 576 576 576 576 576
## man.stor man.vs man.tic man.ua man.vfa
## 576 576 576 576 576
## time.incorp man.area dist.inj furrow.z furrow.w
## 576 576 432 576 576
## crop.area lai notes.plot man.trt3 bg.dl
## 576 576 558 576 576
## pH.surf soil.temp soil.temp.z soil.temp.surf rad
## 576 144 144 576 576
## wind.z MOL ustar rl air.pres
## 576 576 576 576 576
## air.pres.unit rh wind.loc far.loc notes.int
## 576 576 576 576 575
## wind.2m soil.type2 exper2 rep2
## 576 576 576 576Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
10. dfsumm summary
Plot-level data
##
## 64 rows and 184 columns
## 64 unique rows
## pub.id
## Class character
## Minimum G
## Maximum G
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:A.F:Agassiz.P:101.T:untreated wide banded.R:1.R2:.T:2019-05-27 10:22:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:D.F:Agassiz.P:404.T:untreated SSD.R:4.R2:.T:2019-06-26 09:13:00.M:Wind tunnelNA
## Mean <NA>
## Unique (excld. NA) 64
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep plot.area
## Class character character character numeric numeric numeric
## Minimum NUGA A Agassiz 101 1 1
## Maximum NUGA D Agassiz 404 4 1
## Mean <NA> <NA> <NA> 252 2.5 1
## Unique (excld. NA) 1 4 1 16 4 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE FALSE TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character logical logical logical
## Minimum 49.2 -122 CA Flat <NA> <NA> <NA>
## Maximum 49.2 -122 CA Flat <NA> <NA> <NA>
## Mean 49.2 -122 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0 0 0
## Missing values 0 0 0 0 64 64 64
## Sorted TRUE TRUE TRUE TRUE <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical character numeric logical logical numeric
## Minimum <NA> Loam 0.14 <NA> <NA> 5.3
## Maximum <NA> Loam 0.35 <NA> <NA> 5.3
## Mean <NA> <NA> 0.218 <NA> <NA> 5.3
## Unique (excld. NA) 0 1 3 0 0 1
## Missing values 64 0 0 64 64 0
## Sorted <NA> TRUE FALSE <NA> <NA> TRUE
##
## soil.dens crop.res till man.source man.source.det
## Class numeric character character character logical
## Minimum 1.08 Yes No cat <NA>
## Maximum 1.08 Yes No cat <NA>
## Mean 1.08 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 64
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.stor
## Class logical character character logical logical
## Minimum <NA> Slurry Gravity separation <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 64 0 0 64 64
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical logical
## Minimum 1.5 <NA> 1.15 0.75 <NA> <NA> <NA>
## Maximum 7.9 <NA> 3.07 1.81 <NA> <NA> <NA>
## Mean 5.36 <NA> 2.39 1.43 <NA> <NA> <NA>
## Unique (excld. NA) 7 0 8 8 0 0 0
## Missing values 0 64 0 0 64 64 64
## Sorted FALSE <NA> FALSE FALSE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 6.8 2019-05-27 10:22:00 2019-05-27 10:22:00 bc
## Maximum 7.6 2019-06-26 09:13:00 2019-06-26 09:13:00 os
## Mean 7.11 2019-06-11 03:40:15 2019-06-11 03:40:15 <NA>
## Unique (excld. NA) 6 4 4 3
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 60 t/ha none <NA> <NA>
## Maximum 60 t/ha none <NA> <NA>
## Mean 60 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0
## Missing values 0 0 0 64 64
## Sorted TRUE TRUE TRUE <NA> <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class numeric logical logical character numeric numeric
## Minimum 20 <NA> <NA> grass 10 <NA>
## Maximum 20 <NA> <NA> grass 10 <NA>
## Mean 20 <NA> <NA> <NA> 10 <NA>
## Unique (excld. NA) 1 0 0 1 1 0
## Missing values 48 64 64 0 0 64
## Sorted TRUE <NA> <NA> TRUE TRUE <NA>
##
## lai notes.plot row.in.file.plot man.trt3 institute
## Class logical character numeric logical character
## Minimum <NA> . 5 <NA> AU
## Maximum <NA> . 68 <NA> AU
## Mean <NA> <NA> 36.5 <NA> <NA>
## Unique (excld. NA) 0 1 64 0 1
## Missing values 64 62 0 64 0
## Sorted <NA> TRUE TRUE <NA> TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det
## Class character character logical
## Minimum separated broadcast Wind tunnel <NA>
## Maximum untreated wide banded Wind tunnel <NA>
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 7 1 0
## Missing values 0 0 64
## Sorted FALSE TRUE <NA>
##
## app.start.orig app.end.orig
## Class character character
## Minimum 04-06-2019 09:38 04-06-2019 09:38
## Maximum 27-05-2019 10:22 27-05-2019 10:22
## Mean <NA> <NA>
## Unique (excld. NA) 4 4
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:A.F:Agassiz.P:101.T:untreated wide banded.R:1.R2:.T:2019-05-27 10:22:00
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:D.F:Agassiz.P:404.T:untreated SSD.R:4.R2:.T:2019-06-26 09:13:00
## Mean <NA>
## Unique (excld. NA) 64
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU.Pr:NUGA.E:A Pedersen, Johanna 45
## Maximum D:1.I:AU.Pr:NUGA.E:D Pedersen, Johanna 109
## Mean <NA> <NA> <NA> 85.8
## Unique (excld. NA) 4 1 1 8
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE
##
## e.1 e.4 e.6 e.12 e.24 e.48 e.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum <NA> 0 0 0 0 0 0
## Maximum <NA> 20.8 26.3 29.2 34.5 38 41.7
## Mean <NA> 7.25 9.23 11.4 15.6 18 19.6
## Unique (excld. NA) 0 59 60 61 61 64 64
## Missing values 64 0 0 0 0 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.96 e.168 e.final e.tot e.cum.1 e.cum.4 e.cum.6
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum <NA> <NA> 0 0 <NA> 0 0
## Maximum <NA> <NA> 45.6 45.6 <NA> 20.8 26.3
## Mean <NA> <NA> 20.7 20.7 <NA> 7.25 9.23
## Unique (excld. NA) 0 0 64 64 0 59 60
## Missing values 64 64 0 0 64 0 0
## Sorted <NA> <NA> FALSE FALSE <NA> FALSE FALSE
##
## e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96 e.cum.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 <NA> <NA>
## Maximum 29.2 34.5 38 41.7 <NA> <NA>
## Mean 11.4 15.6 18 19.6 <NA> <NA>
## Unique (excld. NA) 61 61 64 64 0 0
## Missing values 0 0 0 0 64 64
## Sorted FALSE FALSE FALSE FALSE <NA> <NA>
##
## e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6 e.rel.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 0 <NA> 0 0 0
## Maximum 45.6 45.6 <NA> 0.198 0.25 0.278
## Mean 20.7 20.7 <NA> 0.0754 0.0955 0.118
## Unique (excld. NA) 64 64 0 59 60 61
## Missing values 0 0 64 0 0 0
## Sorted FALSE FALSE <NA> FALSE FALSE FALSE
##
## e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168 e.rel.final
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 <NA> <NA> 0
## Maximum 0.328 0.362 0.397 <NA> <NA> 0.434
## Mean 0.161 0.188 0.204 <NA> <NA> 0.216
## Unique (excld. NA) 61 64 64 0 0 64
## Missing values 0 0 0 64 64 0
## Sorted FALSE FALSE FALSE <NA> <NA> FALSE
##
## e.rel.tot rain.1 rain.4 rain.6 rain.12 rain.24 rain.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 <NA> 0 0 0 0 0
## Maximum 0.434 <NA> 0 0 0 0 0
## Mean 0.216 <NA> 0 0 0 0 0
## Unique (excld. NA) 64 0 1 1 1 1 1
## Missing values 0 64 0 0 0 0 0
## Sorted FALSE <NA> TRUE TRUE TRUE TRUE TRUE
##
## rain.72 rain.96 rain.168 rain.final rain.tot air.temp.1
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 <NA> <NA> 0 0 <NA>
## Maximum 0 <NA> <NA> 0 0 <NA>
## Mean 0 <NA> <NA> 0 0 <NA>
## Unique (excld. NA) 1 0 0 1 1 0
## Missing values 0 64 64 0 0 64
## Sorted TRUE <NA> <NA> TRUE TRUE <NA>
##
## air.temp.4 air.temp.6 air.temp.12 air.temp.24 air.temp.48
## Class numeric numeric numeric numeric numeric
## Minimum 16.5 16.5 18.1 15.7 13.8
## Maximum 22.4 22.5 24.1 21 19
## Mean 19.4 20.5 21.3 18.1 16.9
## Unique (excld. NA) 4 4 4 4 4
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.72 air.temp.96 air.temp.168 air.temp.mn wind.1
## Class numeric numeric numeric numeric numeric
## Minimum 13.7 13.7 13.7 13.7 <NA>
## Maximum 17.7 17.9 17.9 17.9 <NA>
## Mean 16.2 16 16 16 <NA>
## Unique (excld. NA) 4 4 4 4 0
## Missing values 0 0 0 0 64
## Sorted FALSE FALSE FALSE FALSE <NA>
##
## wind.4 wind.6 wind.12 wind.24 wind.48 wind.72 wind.96
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1 1 1 1 1 1 1
## Maximum 1 1 1 1 1 1 1
## Mean 1 1 1 1 1 1 1
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## wind.168 wind.mn rain.rate.1 rain.rate.4 rain.rate.6
## Class numeric numeric numeric numeric numeric
## Minimum 1 1 <NA> 0 0
## Maximum 1 1 <NA> 0 0
## Mean 1 1 <NA> 0 0
## Unique (excld. NA) 1 1 0 1 1
## Missing values 0 0 64 0 0
## Sorted TRUE TRUE <NA> TRUE TRUE
##
## rain.rate.12 rain.rate.24 rain.rate.48 rain.rate.72
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.96 rain.rate.168 rain.rate.mn soil.temp.1
## Class numeric numeric numeric numeric
## Minimum 0 0 0 <NA>
## Maximum 0 0 0 <NA>
## Mean 0 0 0 <NA>
## Unique (excld. NA) 1 1 1 0
## Missing values 0 0 0 64
## Sorted TRUE TRUE TRUE <NA>
##
## soil.temp.4 soil.temp.6 soil.temp.12 soil.temp.24
## Class numeric numeric numeric numeric
## Minimum 17.4 20.3 20.3 18.7
## Maximum 24.4 24.4 25.5 22.5
## Mean 21 22.9 23.3 20.5
## Unique (excld. NA) 3 3 3 3
## Missing values 16 16 16 16
## Sorted FALSE FALSE FALSE FALSE
##
## soil.temp.48 soil.temp.72 soil.temp.96 soil.temp.168
## Class numeric numeric numeric numeric
## Minimum 18.6 18.7 18.6 18.6
## Maximum 21.4 20 19.3 19.3
## Mean 19.7 19.2 18.9 18.9
## Unique (excld. NA) 3 3 3 3
## Missing values 16 16 16 16
## Sorted FALSE FALSE FALSE FALSE
##
## soil.temp.mn first.row.in.file.int last.row.in.file.int
## Class numeric numeric numeric
## Minimum 18.6 5 13
## Maximum 19.3 572 580
## Mean 18.9 288 296
## Unique (excld. NA) 3 64 64
## Missing values 16 0 0
## Sorted FALSE TRUE TRUE
##
## n.ints dt1 j.rel1 j.NH31 dt.min dt.max ct.min
## Class integer numeric numeric numeric numeric numeric numeric
## Minimum 9 1.97 0 0 1.97 17.7 1.97
## Maximum 9 2 0.0774 8.13 2 18 2
## Mean 9 1.98 0.0279 2.65 1.98 17.8 1.98
## Unique (excld. NA) 1 3 57 57 3 4 3
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE FALSE FALSE FALSE
##
## ct.max t.start.p t.end.p air.temp.z
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 93.7 2019-05-27 10:22:00 2019-05-30 14:38:00 2
## Maximum 95 2019-06-26 09:13:00 2019-06-28 14:39:00 2
## Mean 94.4 2019-06-11 03:40:15 2019-06-14 02:40:30 2
## Unique (excld. NA) 4 4 4 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE
##
## soil.temp.z wind.z wind.loc far.loc
## Class numeric logical logical logical
## Minimum 0.05 <NA> <NA> <NA>
## Maximum 0.05 <NA> <NA> <NA>
## Mean 0.05 <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0
## Missing values 16 64 64 64
## Sorted TRUE <NA> <NA> <NA>
##
## pub.info
## Class character
## Minimum Pedersen, J., Nyord, T., Feilberg, A., Labouriau, R., Hunt, D., & Bittman, S. (2021). Effect of exposed surface area and enhanced infiltration on ammonia emission from untreated and separated cattle slurry. Biosystems Engineering, 211, 141–151. https://doi.org/10.1016/j.biosystemseng.2020.12.005
## Maximum Pedersen, J., Nyord, T., Feilberg, A., Labouriau, R., Hunt, D., & Bittman, S. (2021). Effect of exposed surface area and enhanced infiltration on ammonia emission from untreated and separated cattle slurry. Biosystems Engineering, 211, 141–151. https://doi.org/10.1016/j.biosystemseng.2020.12.005
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE Wind tunnel wt
## Maximum <NA> <NA> <NA> FALSE Wind tunnel wt
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 64 64 64 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig
## Class character character character
## Minimum Grass Cattle Band spread or trailing hose
## Maximum Grass Cattle Wide band
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 4
## Missing values 0 0 0
## Sorted TRUE TRUE FALSE
##
## app.method2 incorp.orig date.start
## Class character character Date
## Minimum bc None 2019-05-27
## Maximum os None 2019-06-26
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 3 1 4
## Missing values 0 0 0
## Sorted FALSE TRUE TRUE
## Interval-level emission data
##
## 576 rows and 137 columns
## 576 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:A.F:Agassiz.P:101.T:untreated wide banded.R:1.R2:.T:2019-05-27 10:22:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:D.F:Agassiz.P:404.T:untreated SSD.R:4.R2:.T:2019-06-26 09:13:00.M:Wind tunnelNA
## Mean <NA>
## Unique (excld. NA) 64
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class character character character character numeric numeric
## Minimum G NUGA A Agassiz 101 1
## Maximum G NUGA D Agassiz 404 4
## Mean <NA> <NA> <NA> <NA> 252 2.5
## Unique (excld. NA) 1 1 4 1 16 4
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE FALSE FALSE
##
## treat meas.tech meas.tech.det plot.area
## Class character character logical numeric
## Minimum separated broadcast Wind tunnel <NA> 1
## Maximum untreated wide banded Wind tunnel <NA> 1
## Mean <NA> <NA> <NA> 1
## Unique (excld. NA) 7 1 0 1
## Missing values 0 0 576 0
## Sorted FALSE TRUE <NA> TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character logical logical logical
## Minimum 49.2 -122 CA Flat <NA> <NA> <NA>
## Maximum 49.2 -122 CA Flat <NA> <NA> <NA>
## Mean 49.2 -122 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0 0 0
## Missing values 0 0 0 0 576 576 576
## Sorted TRUE TRUE TRUE TRUE <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical character numeric logical logical numeric
## Minimum <NA> Loam 0.14 <NA> <NA> 5.3
## Maximum <NA> Loam 0.35 <NA> <NA> 5.3
## Mean <NA> <NA> 0.218 <NA> <NA> 5.3
## Unique (excld. NA) 0 1 3 0 0 1
## Missing values 576 0 0 576 576 0
## Sorted <NA> TRUE FALSE <NA> <NA> TRUE
##
## soil.dens crop.res till man.source man.source.det
## Class numeric character character character logical
## Minimum 1.08 Yes No cat <NA>
## Maximum 1.08 Yes No cat <NA>
## Mean 1.08 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 576
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.stor
## Class logical character character logical logical
## Minimum <NA> Slurry Gravity separation <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 576 0 0 576 576
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical logical
## Minimum 1.5 <NA> 1.15 0.75 <NA> <NA> <NA>
## Maximum 7.9 <NA> 3.07 1.81 <NA> <NA> <NA>
## Mean 5.36 <NA> 2.39 1.43 <NA> <NA> <NA>
## Unique (excld. NA) 7 0 8 8 0 0 0
## Missing values 0 576 0 0 576 576 576
## Sorted FALSE <NA> FALSE FALSE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 6.8 2019-05-27 10:22:00 2019-05-27 10:22:00 bc
## Maximum 7.6 2019-06-26 09:13:00 2019-06-26 09:13:00 os
## Mean 7.11 2019-06-11 03:40:15 2019-06-11 03:40:15 <NA>
## Unique (excld. NA) 6 4 4 3
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 60 t/ha none <NA> <NA>
## Maximum 60 t/ha none <NA> <NA>
## Mean 60 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0
## Missing values 0 0 0 576 576
## Sorted TRUE TRUE TRUE <NA> <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class numeric logical logical character numeric numeric
## Minimum 20 <NA> <NA> grass 10 <NA>
## Maximum 20 <NA> <NA> grass 10 <NA>
## Mean 20 <NA> <NA> <NA> 10 <NA>
## Unique (excld. NA) 1 0 0 1 1 0
## Missing values 432 576 576 0 0 576
## Sorted TRUE <NA> <NA> TRUE TRUE <NA>
##
## lai notes.plot row.in.file.plot man.trt3 institute
## Class logical character numeric logical character
## Minimum <NA> . 5 <NA> AU
## Maximum <NA> . 68 <NA> AU
## Mean <NA> <NA> 36.5 <NA> <NA>
## Unique (excld. NA) 0 1 64 0 1
## Missing values 576 558 0 576 0
## Sorted <NA> TRUE TRUE <NA> TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 04-06-2019 09:38 04-06-2019 09:38
## Maximum 27-05-2019 10:22 27-05-2019 10:22
## Mean <NA> <NA>
## Unique (excld. NA) 4 4
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:A.F:Agassiz.P:101.T:untreated wide banded.R:1.R2:.T:2019-05-27 10:22:00
## Maximum D:1.I:AU.Pr:NUGA.F:../../data-submitted/03/AU/ALFAM2_template_5_2_210929_JP_CanadianData.xlsx.E:D.F:Agassiz.P:404.T:untreated SSD.R:4.R2:.T:2019-06-26 09:13:00
## Mean <NA>
## Unique (excld. NA) 64
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU.Pr:NUGA.E:A Pedersen, Johanna 45
## Maximum D:1.I:AU.Pr:NUGA.E:D Pedersen, Johanna 109
## Mean <NA> <NA> <NA> 85.8
## Unique (excld. NA) 4 1 1 8
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE
##
## interval t.start t.end dt
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 1 2019-05-27 10:22:00 2019-05-27 12:21:00 1.97
## Maximum 9 2019-06-28 14:39:00 2019-06-29 08:12:00 18
## Mean 5 2019-06-12 08:28:56 2019-06-12 18:17:46 10.5
## Unique (excld. NA) 9 36 36 34
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE
##
## bg.dl bg.val bg.unit j.NH3 j.NH3.unit pH.surf
## Class logical numeric character numeric character logical
## Minimum <NA> 0 kg N/ha-hr 0 kg N/ha-hr <NA>
## Maximum <NA> 0.797 kg N/ha-hr 8.13 kg N/ha-hr <NA>
## Mean <NA> 0.00574 <NA> 0.5 <NA> <NA>
## Unique (excld. NA) 0 9 1 350 1 0
## Missing values 576 0 0 0 0 576
## Sorted <NA> FALSE TRUE FALSE TRUE <NA>
##
## air.temp air.temp.z soil.temp soil.temp.z soil.temp.surf
## Class numeric numeric numeric numeric logical
## Minimum 10.9 2 15.8 0.05 <NA>
## Maximum 24.9 2 26.1 0.05 <NA>
## Mean 17.2 2 19.7 0.05 <NA>
## Unique (excld. NA) 31 1 24 1 0
## Missing values 0 0 144 144 576
## Sorted FALSE TRUE FALSE TRUE <NA>
##
## rad wind wind.z MOL ustar rl air.pres
## Class logical numeric logical logical logical logical logical
## Minimum <NA> 1 <NA> <NA> <NA> <NA> <NA>
## Maximum <NA> 1 <NA> <NA> <NA> <NA> <NA>
## Mean <NA> 1 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 0 0
## Missing values 576 0 576 576 576 576 576
## Sorted <NA> TRUE <NA> <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc notes.int
## Class logical numeric logical logical logical character
## Minimum <NA> 0 <NA> <NA> <NA> .
## Maximum <NA> 0 <NA> <NA> <NA> .
## Mean <NA> 0 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 1
## Missing values 576 0 576 576 576 575
## Sorted <NA> TRUE <NA> <NA> <NA> TRUE
##
## row.in.file.int j.type t.start.orig
## Class numeric character character
## Minimum 5 emission rate 04-06-2019 09:38
## Maximum 580 emission rate 30-05-2019 14:38
## Mean 292 <NA> <NA>
## Unique (excld. NA) 576 1 36
## Missing values 0 0 0
## Sorted TRUE TRUE FALSE
##
## t.end.orig j.NH3.unit.orig j.NH3.orig j.NH3.conv.fact
## Class character character numeric numeric
## Minimum 04-06-2019 09:38 kg N/ha-hr 0 1
## Maximum 30-05-2019 14:38 kg N/ha-hr 8.13 1
## Mean <NA> <NA> 0.5 1
## Unique (excld. NA) 36 1 350 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE FALSE TRUE
##
## dt.calc dt.diff ct mt cta bta flag.int
## Class numeric numeric numeric numeric numeric numeric character
## Minimum -22 -0.00333 1.97 0.985 -22 -22
## Maximum 17.9 24 95 86.2 94.8 77.3
## Mean 9.81 0.678 44.6 39.4 38.6 28.8 <NA>
## Unique (excld. NA) 33 10 35 35 34 31 1
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE TRUE
##
## rain.rate rain.cum wind.2m e.int e.cum e e.rel
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 <NA> 0 0 0 0
## Maximum 0 0 <NA> 16.1 45.6 45.6 0.434
## Mean 0 0 <NA> 2.3 15.8 15.8 0.165
## Unique (excld. NA) 1 1 0 350 350 350 350
## Missing values 0 0 576 0 0 0 0
## Sorted TRUE TRUE <NA> FALSE FALSE FALSE FALSE
##
## j.rel
## Class numeric
## Minimum 0
## Maximum 0.0774
## Mean 0.0052
## Unique (excld. NA) 350
## Missing values 0
## Sorted FALSE
##
## pub.info
## Class character
## Minimum Pedersen, J., Nyord, T., Feilberg, A., Labouriau, R., Hunt, D., & Bittman, S. (2021). Effect of exposed surface area and enhanced infiltration on ammonia emission from untreated and separated cattle slurry. Biosystems Engineering, 211, 141–151. https://doi.org/10.1016/j.biosystemseng.2020.12.005
## Maximum Pedersen, J., Nyord, T., Feilberg, A., Labouriau, R., Hunt, D., & Bittman, S. (2021). Effect of exposed surface area and enhanced infiltration on ammonia emission from untreated and separated cattle slurry. Biosystems Engineering, 211, 141–151. https://doi.org/10.1016/j.biosystemseng.2020.12.005
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE Wind tunnel wt
## Maximum <NA> <NA> <NA> FALSE Wind tunnel wt
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 576 576 576 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig
## Class character character character
## Minimum Grass Cattle Band spread or trailing hose
## Maximum Grass Cattle Wide band
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 1 4
## Missing values 0 0 0
## Sorted TRUE TRUE FALSE
##
## app.method2 incorp.orig date.start first.row.int row.plot
## Class character character Date numeric numeric
## Minimum bc None 2019-05-27 5 5
## Maximum os None 2019-05-27 572 68
## Mean <NA> <NA> <NA> 288 36.5
## Unique (excld. NA) 3 1 1 64 64
## Missing values 0 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE TRUE
##
## first.rows ggplotgroup
## Class factor factor
## Minimum Plots 10 Emis. 50 (4.94,10.7]
## Maximum Plots 9 Emis. 41 (62.3,68.1]
## Mean Plots 41 Emis. 329 (33.6,39.4]
## Unique (excld. NA) 64 11
## Missing values 0 0
## Sorted FALSE TRUE
##