Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:52:24.087175"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU | Pedersen, Johanna; Kamp, Jesper | 1 | 2023-11-10 |
2. Contributors
| contributor | institute |
|---|---|
| Pedersen, Johanna | Aarhus University |
| Kamp, Jesper | Aarhus University |
| Pacholski, Andreas | Thünen Institute |
| Hafner, Sasha | Aarhus University |
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## OKMissing or double interval number
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| bLS | 1011 |
| Dynamic chamber | 2867 |
| Wind tunnel | 71 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| chamber | 2867 |
| micro met | 1011 |
| wt | 71 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit | |
|---|---|---|---|
| 1 | kg N/ha-hr | 1.0000000 | kg N/ha-hr |
| 543 | ug NH3/m2/s | 0.0296079 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : OK
## soil.temp.surf : OK
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## pub.id meas.tech.det oc soil.type soil.water.v
## 3949 3949 3949 3949 3949
## soil.ph man.bed man.trt2 man.trt3 man.stor
## 3949 3949 3949 3949 3949
## man.vs man.tic man.ua man.vfa time.incorp
## 3949 3949 3949 3949 3949
## man.area dist.inj furrow.z furrow.w crop.area
## 3949 3949 3949 3949 3949
## lai notes.plot bg.dl pH.surf soil.temp
## 3949 3923 3949 3949 2938
## soil.temp.z soil.temp.surf rad wind.z MOL
## 2938 2938 2938 2938 3090
## ustar rl air.pres air.pres.unit rh
## 3090 3090 2938 2937 2938
## far.loc notes.int j.NH3.orig wind.2m pub.info
## 3949 3945 208 2938 3949
## soil.type2 exper2 rep2
## 3949 3949 3949Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
10. dfsumm summary
Plot-level data
##
## 37 rows and 225 columns
## 37 unique rows
## pub.id proj exper
## Class logical character character
## Minimum <NA> MAG testA
## Maximum <NA> MAG testC
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 0 1 3
## Missing values 37 0 0
## Sorted <NA> TRUE TRUE
##
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testA.F:A.P:plot1.T:WT.R:1.R2:.T:2022-10-11 15:24:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testC.F:A.P:plot8th.T:DFC_th.R:6.R2:.T:2022-11-24 12:57:00.M:Dynamic chamberNA
## Mean <NA>
## Unique (excld. NA) 37
## Missing values 0
## Sorted TRUE
##
## field plot rep plot.area lat long
## Class character character numeric numeric numeric numeric
## Minimum A plot1 1 0.2 56.5 9.56
## Maximum A plot9 9 100 56.5 9.56
## Mean <NA> <NA> 4 5.82 56.5 9.56
## Unique (excld. NA) 1 30 9 5 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE TRUE TRUE
##
## country topo soil.samp.z clay silt sand
## Class character character character numeric numeric numeric
## Minimum DK Flat 0-5 9 24 65
## Maximum DK Flat 0-5 9 24 65
## Mean <NA> <NA> <NA> 9 24 65
## Unique (excld. NA) 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical logical numeric logical character logical
## Minimum <NA> <NA> 0.19 <NA> Wet <NA>
## Maximum <NA> <NA> 0.22 <NA> Wet <NA>
## Mean <NA> <NA> 0.21 <NA> <NA> <NA>
## Unique (excld. NA) 0 0 2 0 1 0
## Missing values 37 37 0 37 0 37
## Sorted <NA> <NA> TRUE <NA> TRUE <NA>
##
## soil.dens crop.res till man.source
## Class numeric character character character
## Minimum 1.3 Yes No mix
## Maximum 1.3 Yes No mix
## Mean 1.3 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## man.source.det
## Class character
## Minimum mix of slurry co-digested with other agricultural residues
## Maximum mix of slurry co-digested with other agricultural residues
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry Anaerobic digestion <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 0 0
## Missing values 37 0 0 37 37
## Sorted <NA> TRUE TRUE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 5.03 <NA> 2.61 1.83 <NA> <NA>
## Maximum <NA> 5.99 <NA> 2.73 2 <NA> <NA>
## Mean <NA> 5.45 <NA> 2.66 1.93 <NA> <NA>
## Unique (excld. NA) 0 3 0 3 3 0 0
## Missing values 37 0 37 0 0 37 37
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class logical numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum <NA> 7.5 2022-10-11 15:24:00 2022-10-14 04:58:00
## Maximum <NA> 7.6 2022-11-24 13:30:00 2022-12-02 23:24:00
## Mean <NA> 7.54 2022-11-08 03:08:45 2022-11-13 14:21:50
## Unique (excld. NA) 0 2 37 37
## Missing values 37 0 0 0
## Sorted <NA> TRUE FALSE FALSE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 35 t/ha none <NA>
## Maximum os 45 t/ha none <NA>
## Mean <NA> 37.4 <NA> <NA> <NA>
## Unique (excld. NA) 2 2 1 1 0
## Missing values 0 0 0 0 37
## Sorted FALSE FALSE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class logical logical logical logical character numeric
## Minimum <NA> <NA> <NA> <NA> stubble 8
## Maximum <NA> <NA> <NA> <NA> stubble 8
## Mean <NA> <NA> <NA> <NA> <NA> 8
## Unique (excld. NA) 0 0 0 0 1 1
## Missing values 37 37 37 37 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 41 AU
## Mean <NA> <NA> <NA> 23 <NA>
## Unique (excld. NA) 0 0 1 37 1
## Missing values 37 37 36 0 0
## Sorted <NA> <NA> TRUE FALSE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det app.start.orig
## Class character character logical POSIXct, POSIXt
## Minimum bLS bLS <NA> 2022-10-11 15:24:00
## Maximum WT Wind tunnel <NA> 2022-11-24 13:30:00
## Mean <NA> <NA> <NA> 2022-11-08 03:08:45
## Unique (excld. NA) 7 3 0 37
## Missing values 0 0 37 0
## Sorted FALSE FALSE <NA> FALSE
##
## app.end.orig
## Class POSIXct, POSIXt
## Minimum 2022-10-14 04:58:00
## Maximum 2022-12-02 23:24:00
## Mean 2022-11-13 14:21:50
## Unique (excld. NA) 37
## Missing values 0
## Sorted FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testA.F:A.P:plot1.T:WT.R:1.R2:.T:2022-10-11 15:24:00
## Maximum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testC.F:A.P:plot8th.T:DFC_th.R:6.R2:.T:2022-11-24 12:57:00
## Mean <NA>
## Unique (excld. NA) 37
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:AU.Pr:MAG.E:testA
## Maximum D:1.I:AU.Pr:MAG.E:testC
## Mean <NA> <NA>
## Unique (excld. NA) 3 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app e.1 e.4
## Class character numeric numeric numeric
## Minimum Pedersen, Johanna; Kamp, Jesper 64 0.0013 0.00591
## Maximum Pedersen, Johanna; Kamp, Jesper 90 1.8 11.4
## Mean <NA> 72.3 0.602 5.94
## Unique (excld. NA) 1 4 3 37
## Missing values 0 0 34 0
## Sorted TRUE FALSE FALSE FALSE
##
## e.6 e.12 e.24 e.48 e.72 e.96 e.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.00732 0.0206 0.0694 0.125 0.224 0.241 0.24
## Maximum 15.9 25.7 36 44.4 48.7 51.2 36.2
## Mean 8.24 13.4 19.2 24 20.2 21.4 14.7
## Unique (excld. NA) 37 37 37 37 25 25 16
## Missing values 0 0 0 0 12 12 21
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.final e.tot e.cum.1 e.cum.4 e.cum.6 e.cum.12 e.cum.24
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.241 0.241 0.0013 0.00591 0.00732 0.0206 0.0694
## Maximum 56.4 56.4 1.8 11.4 15.9 25.7 36
## Mean 28.5 28.5 0.602 5.94 8.24 13.4 19.2
## Unique (excld. NA) 37 37 3 37 37 37 37
## Missing values 0 0 34 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.48 e.cum.72 e.cum.96 e.cum.168 e.cum.final e.cum.tot
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.125 0.224 0.241 0.24 0.241 0.241
## Maximum 44.4 48.7 51.2 36.2 56.4 56.4
## Mean 24 20.2 21.4 14.7 28.5 28.5
## Unique (excld. NA) 37 25 25 16 37 37
## Missing values 0 12 12 21 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.1 e.rel.4 e.rel.6 e.rel.12 e.rel.24 e.rel.48
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.93e-05 8.75e-05 0.000108 0.000305 0.00103 0.00186
## Maximum 0.0281 0.177 0.249 0.401 0.562 0.694
## Mean 0.0094 0.0826 0.115 0.185 0.264 0.329
## Unique (excld. NA) 3 37 37 37 37 37
## Missing values 34 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.72 e.rel.96 e.rel.168 e.rel.final e.rel.tot rain.1
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.00332 0.00356 0.00356 0.00357 0.00357 0
## Maximum 0.76 0.799 0.535 0.881 0.881 0
## Mean 0.31 0.328 0.218 0.396 0.396 0
## Unique (excld. NA) 25 25 16 37 37 1
## Missing values 12 12 21 0 0 34
## Sorted FALSE FALSE FALSE FALSE FALSE TRUE
##
## rain.4 rain.6 rain.12 rain.24 rain.48 rain.72 rain.96
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 0 0 0
## Maximum 0 0 0 0 1 1 1
## Mean 0 0 0 0 0.0541 0.08 0.08
## Unique (excld. NA) 1 1 1 1 2 2 2
## Missing values 0 0 0 0 0 12 12
## Sorted TRUE TRUE TRUE TRUE FALSE FALSE FALSE
##
## rain.168 rain.final rain.tot air.temp.1 air.temp.4
## Class numeric numeric numeric numeric numeric
## Minimum 0 0 0 6.1 6.33
## Maximum 1 1 1 8.09 10.7
## Mean 0.125 0.0541 0.0541 6.76 8.29
## Unique (excld. NA) 2 2 2 2 11
## Missing values 21 0 0 34 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.6 air.temp.12 air.temp.24 air.temp.48 air.temp.72
## Class numeric numeric numeric numeric numeric
## Minimum 6.52 6.59 6.66 5.76 4.63
## Maximum 10.2 9.3 9.85 9.87 10
## Mean 8.13 7.75 7.76 7.36 7.16
## Unique (excld. NA) 15 27 27 32 31
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.96 air.temp.168 air.temp.mn wind.1 wind.4 wind.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 3.52 2 2 2.21 0.33 0.33
## Maximum 10 10 10 5.72 5.48 5.46
## Mean 6.78 5.87 6 3.38 1.14 1.14
## Unique (excld. NA) 34 35 35 2 4 4
## Missing values 0 0 0 34 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.12 wind.24 wind.48 wind.72 wind.96 wind.168 wind.mn
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.33 0.33 0.33 0.33 0.33 0.33 0.33
## Maximum 5.25 5.29 5.15 4.32 3.79 2.96 2.97
## Mean 1.12 1.14 1.12 1.09 1.09 1.06 1.14
## Unique (excld. NA) 4 4 4 4 4 5 8
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## rain.rate.1 rain.rate.4 rain.rate.6 rain.rate.12
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 34 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.24 rain.rate.48 rain.rate.72 rain.rate.96
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0.0208 0.0139 0.0104
## Mean 0 0.00113 0.000751 0.000563
## Unique (excld. NA) 1 2 2 2
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE
##
## rain.rate.168 rain.rate.mn soil.temp.1 soil.temp.4
## Class numeric numeric numeric numeric
## Minimum 0 0 1 1
## Maximum 0.00595 0.00595 1 1
## Mean 0.000322 0.000322 1 1
## Unique (excld. NA) 2 2 1 1
## Missing values 0 0 34 34
## Sorted FALSE FALSE TRUE TRUE
##
## soil.temp.6 soil.temp.12 soil.temp.24 soil.temp.48
## Class numeric numeric numeric numeric
## Minimum 1 1 1 1
## Maximum 1 1 1 1
## Mean 1 1 1 1
## Unique (excld. NA) 1 1 1 1
## Missing values 34 34 34 34
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.72 soil.temp.96 soil.temp.168 soil.temp.mn
## Class numeric numeric numeric numeric
## Minimum 1 1 1 1
## Maximum 1 1 1 1
## Mean 1 1 1 1
## Unique (excld. NA) 1 1 1 1
## Missing values 34 34 34 34
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.surf.1 soil.temp.surf.4 soil.temp.surf.6
## Class numeric numeric numeric
## Minimum 1 1 1
## Maximum 1 1 1
## Mean 1 1 1
## Unique (excld. NA) 1 1 1
## Missing values 34 34 34
## Sorted TRUE TRUE TRUE
##
## soil.temp.surf.12 soil.temp.surf.24 soil.temp.surf.48
## Class numeric numeric numeric
## Minimum 1 1 1
## Maximum 1 1 1
## Mean 1 1 1
## Unique (excld. NA) 1 1 1
## Missing values 34 34 34
## Sorted TRUE TRUE TRUE
##
## soil.temp.surf.72 soil.temp.surf.96 soil.temp.surf.168
## Class numeric numeric numeric
## Minimum 0.906 0.854 0.786
## Maximum 1 1 0.976
## Mean 0.969 0.951 0.913
## Unique (excld. NA) 2 2 2
## Missing values 34 34 34
## Sorted TRUE TRUE TRUE
##
## soil.temp.surf.mn wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12
## Class numeric numeric numeric numeric numeric
## Minimum 0.789 2.54 2.71 2.64 2.51
## Maximum 0.979 6.59 6.31 6.29 6.04
## Mean 0.916 3.89 3.91 3.86 3.69
## Unique (excld. NA) 2 2 2 2 2
## Missing values 34 34 34 34 34
## Sorted TRUE FALSE FALSE FALSE FALSE
##
## wind.2m.24 wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168
## Class numeric numeric numeric numeric numeric
## Minimum 2.76 2.52 2.38 2.62 2.52
## Maximum 6.09 5.93 4.97 4.36 3.41
## Mean 3.87 3.66 3.24 3.2 2.82
## Unique (excld. NA) 2 2 2 2 3
## Missing values 34 34 34 34 34
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.mn rad.1 rad.4 rad.6 rad.12 rad.24 rad.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 2.52 1 1 1 0.521 0.333 0.354
## Maximum 3.42 1 1 1 0.688 0.375 0.375
## Mean 2.83 1 1 1 0.576 0.347 0.361
## Unique (excld. NA) 3 1 1 1 2 2 2
## Missing values 34 34 34 34 34 34 34
## Sorted FALSE TRUE TRUE TRUE FALSE FALSE FALSE
##
## rad.72 rad.96 rad.168 rad.mn rh.1 rh.4 rh.6
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.361 0.354 0.339 0.342 1 1 1
## Maximum 0.389 0.406 0.387 0.39 1 1 1
## Mean 0.37 0.372 0.355 0.358 1 1 1
## Unique (excld. NA) 2 2 2 2 1 1 1
## Missing values 34 34 34 34 34 34 34
## Sorted FALSE FALSE FALSE FALSE TRUE TRUE TRUE
##
## rh.12 rh.24 rh.48 rh.72 rh.96 rh.168 rh.mn
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1 1 1 1 1 1 1
## Maximum 1 1 1 1 1 1 1
## Mean 1 1 1 1 1 1 1
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 34 34 34 34 34 34 34
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## first.row.in.file.int last.row.in.file.int n.ints dt1
## Class numeric numeric integer numeric
## Minimum 5 30 19 0.5
## Maximum 3620 3960 337 2.4
## Mean 1150 1250 107 1.71
## Unique (excld. NA) 37 37 16 4
## Missing values 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE
##
## j.rel1 j.NH31 dt.min dt.max ct.min ct.max
## Class numeric numeric numeric numeric numeric numeric
## Minimum 1.4e-05 0.000944 0.5 0.5 0.5 60
## Maximum 0.0484 3.1 2.38 7.2 2.4 203
## Mean 0.022 1.58 1.66 3.74 1.71 145
## Unique (excld. NA) 37 37 5 7 4 9
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## t.start.p t.end.p air.temp.z
## Class POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 2022-10-11 15:24:00 2022-10-13 21:46:00 2
## Maximum 2022-11-24 13:30:00 2022-12-02 22:04:00 2
## Mean 2022-11-08 03:05:11 2022-11-14 01:59:48 2
## Unique (excld. NA) 36 36 1
## Missing values 0 0 0
## Sorted FALSE FALSE TRUE
##
## soil.temp.z wind.z wind.loc far.loc pub.info soil.type2
## Class logical logical character logical logical logical
## Minimum FALSE TRUE Field <NA> <NA> <NA>
## Maximum FALSE TRUE Plot <NA> <NA> <NA>
## Mean 0 TRUE 1 TRUE <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 2 0 0 0
## Missing values 34 34 0 37 37 37
## Sorted TRUE TRUE FALSE <NA> <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig meas.tech2 crop.orig
## Class logical logical logical character character character
## Minimum <NA> <NA> FALSE bLS chamber Stubble
## Maximum <NA> <NA> FALSE Wind tunnel wt Stubble
## Mean <NA> <NA> 0 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 3 3 1
## Missing values 37 37 0 0 0 0
## Sorted <NA> <NA> TRUE FALSE FALSE TRUE
##
## man.source.orig app.method.orig app.method2
## Class character character character
## Minimum Mix Band spread or trailing hose bsth
## Maximum Mix Open slot injection os
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 2 2
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## incorp.orig date.start
## Class character Date
## Minimum None 2022-10-11
## Maximum None 2022-11-24
## Mean <NA> <NA>
## Unique (excld. NA) 1 3
## Missing values 0 0
## Sorted TRUE TRUE
## Interval-level emission data
##
## 3949 rows and 138 columns
## 3949 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testA.F:A.P:plot1.T:WT.R:1.R2:.T:2022-10-11 15:24:00.M:Wind tunnelNA
## Maximum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testC.F:A.P:plot8th.T:DFC_th.R:6.R2:.T:2022-11-24 12:57:00.M:Dynamic chamberNA
## Mean <NA>
## Unique (excld. NA) 37
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class logical character character character character numeric
## Minimum <NA> MAG testA A plot1 1
## Maximum <NA> MAG testC A plot9 9
## Mean <NA> <NA> <NA> <NA> <NA> 3.33
## Unique (excld. NA) 0 1 3 1 30 9
## Missing values 3949 0 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE FALSE FALSE
##
## treat meas.tech meas.tech.det plot.area lat
## Class character character logical numeric numeric
## Minimum bLS bLS <NA> 0.2 56.5
## Maximum WT Wind tunnel <NA> 100 56.5
## Mean <NA> <NA> <NA> 17.6 56.5
## Unique (excld. NA) 7 3 0 5 1
## Missing values 0 0 3949 0 0
## Sorted FALSE FALSE <NA> FALSE TRUE
##
## long country topo soil.samp.z clay silt
## Class numeric character character character numeric numeric
## Minimum 9.56 DK Flat 0-5 9 24
## Maximum 9.56 DK Flat 0-5 9 24
## Mean 9.56 <NA> <NA> <NA> 9 24
## Unique (excld. NA) 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## sand oc soil.type soil.water soil.water.v soil.moist
## Class numeric logical logical numeric logical character
## Minimum 65 <NA> <NA> 0.19 <NA> Wet
## Maximum 65 <NA> <NA> 0.22 <NA> Wet
## Mean 65 <NA> <NA> 0.218 <NA> <NA>
## Unique (excld. NA) 1 0 0 2 0 1
## Missing values 0 3949 3949 0 3949 0
## Sorted TRUE <NA> <NA> TRUE <NA> TRUE
##
## soil.ph soil.dens crop.res till man.source
## Class logical numeric character character character
## Minimum <NA> 1.3 Yes No mix
## Maximum <NA> 1.3 Yes No mix
## Mean <NA> 1.3 <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 1 1
## Missing values 3949 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE TRUE
##
## man.source.det
## Class character
## Minimum mix of slurry co-digested with other agricultural residues
## Maximum mix of slurry co-digested with other agricultural residues
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry Anaerobic digestion <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 0 0
## Missing values 3949 0 0 3949 3949
## Sorted <NA> TRUE TRUE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 5.03 <NA> 2.61 1.83 <NA> <NA>
## Maximum <NA> 5.99 <NA> 2.73 2 <NA> <NA>
## Mean <NA> 5.21 <NA> 2.69 1.91 <NA> <NA>
## Unique (excld. NA) 0 3 0 3 3 0 0
## Missing values 3949 0 3949 0 0 3949 3949
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class logical numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum <NA> 7.5 2022-10-11 15:24:00 2022-10-14 04:58:00
## Maximum <NA> 7.6 2022-11-24 13:30:00 2022-12-02 23:24:00
## Mean <NA> 7.56 2022-11-19 03:03:00 2022-11-24 16:11:11
## Unique (excld. NA) 0 2 37 37
## Missing values 3949 0 0 0
## Sorted <NA> TRUE FALSE FALSE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 35 t/ha none <NA>
## Maximum os 45 t/ha none <NA>
## Mean <NA> 35.5 <NA> <NA> <NA>
## Unique (excld. NA) 2 2 1 1 0
## Missing values 0 0 0 0 3949
## Sorted FALSE FALSE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class logical logical logical logical character numeric
## Minimum <NA> <NA> <NA> <NA> stubble 8
## Maximum <NA> <NA> <NA> <NA> stubble 8
## Mean <NA> <NA> <NA> <NA> <NA> 8
## Unique (excld. NA) 0 0 0 0 1 1
## Missing values 3949 3949 3949 3949 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 41 AU
## Mean <NA> <NA> <NA> 29.3 <NA>
## Unique (excld. NA) 0 0 1 37 1
## Missing values 3949 3949 3923 0 0
## Sorted <NA> <NA> TRUE FALSE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class POSIXct, POSIXt POSIXct, POSIXt
## Minimum 2022-10-11 15:24:00 2022-10-14 04:58:00
## Maximum 2022-11-24 13:30:00 2022-12-02 23:24:00
## Mean 2022-11-19 03:03:00 2022-11-24 16:11:11
## Unique (excld. NA) 37 37
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testA.F:A.P:plot1.T:WT.R:1.R2:.T:2022-10-11 15:24:00
## Maximum D:1.I:AU.Pr:MAG.F:../../data-submitted/03/AU/ALFAM2_template_7.0_DFCtest_JP_231108_JK.xlsx.E:testC.F:A.P:plot8th.T:DFC_th.R:6.R2:.T:2022-11-24 12:57:00
## Mean <NA>
## Unique (excld. NA) 37
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:AU.Pr:MAG.E:testA
## Maximum D:1.I:AU.Pr:MAG.E:testC
## Mean <NA> <NA>
## Unique (excld. NA) 3 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app interval
## Class character numeric numeric
## Minimum Pedersen, Johanna; Kamp, Jesper 64 1
## Maximum Pedersen, Johanna; Kamp, Jesper 90 337
## Mean <NA> 67.8 87.3
## Unique (excld. NA) 1 4 337
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## t.start t.end dt bg.dl
## Class POSIXct, POSIXt POSIXct, POSIXt numeric logical
## Minimum 2022-10-11 15:24:00 2022-10-11 17:48:00 0.5 <NA>
## Maximum 2022-12-02 22:04:00 2022-12-02 23:24:00 7.2 <NA>
## Mean 2022-11-22 18:22:59 2022-11-22 19:44:26 1.36 <NA>
## Unique (excld. NA) 3417 3417 15 0
## Missing values 0 0 0 3949
## Sorted FALSE FALSE FALSE <NA>
##
## bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class numeric character numeric character logical numeric
## Minimum 0.00492 ppm -0.0393 kg N/ha-hr <NA> -4.83
## Maximum 11.4 ug NH3 /m3 3.1 kg N/ha-hr <NA> 12.7
## Mean 0.215 <NA> 0.144 <NA> <NA> 4.38
## Unique (excld. NA) 1126 2 3869 1 0 529
## Missing values 0 0 0 0 3949 0
## Sorted FALSE FALSE FALSE TRUE <NA> FALSE
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical numeric numeric
## Minimum 2 1 FALSE 0 0
## Maximum 2 1 FALSE 1 1
## Mean 2 1 0 TRUE 0.913 0.357
## Unique (excld. NA) 1 1 1 3 3
## Missing values 0 2938 2938 2938 2938
## Sorted TRUE TRUE TRUE FALSE FALSE
##
## wind wind.z MOL ustar
## Class numeric logical logical logical
## Minimum 0.126 TRUE FALSE FALSE
## Maximum 6.73 TRUE TRUE FALSE
## Mean 1.36 1 TRUE 0.993015133876601 TRUE 0 TRUE
## Unique (excld. NA) 679 1 2 1
## Missing values 0 2938 3090 3090
## Sorted FALSE TRUE FALSE TRUE
##
## rl air.pres air.pres.unit rain
## Class logical numeric character numeric
## Minimum FALSE 1 . 0
## Maximum TRUE 1 hPa 1
## Mean 0.00349243306169965 TRUE 1 <NA> 0.000506
## Unique (excld. NA) 2 1 2 2
## Missing values 3090 2938 2937 0
## Sorted FALSE TRUE TRUE FALSE
##
## rh wind.loc far.loc
## Class numeric character logical
## Minimum 1 Field <NA>
## Maximum 1 Plot <NA>
## Mean 1 <NA> <NA>
## Unique (excld. NA) 1 2 0
## Missing values 2938 0 3949
## Sorted TRUE FALSE <NA>
##
## notes.int
## Class character
## Minimum .
## Maximum Weather station data is 1 hour average, so every other interval is put NaN
## Mean <NA>
## Unique (excld. NA) 2
## Missing values 3945
## Sorted TRUE
##
## row.in.file.int j.type t.start.orig
## Class numeric character POSIXct, POSIXt
## Minimum 5 emission rate 2022-10-11 15:24:00
## Maximum 3960 emission rate 2022-12-02 22:04:00
## Mean 1980 <NA> 2022-11-22 18:22:59
## Unique (excld. NA) 3949 1 3417
## Missing values 0 0 0
## Sorted FALSE TRUE FALSE
##
## t.end.orig j.NH3.unit.orig j.NH3.orig
## Class POSIXct, POSIXt character numeric
## Minimum 2022-10-11 15:24:00 kg N/ha-hr -1.33
## Maximum 2022-12-02 22:04:00 ug NH3/m2/s 80
## Mean 2022-11-22 18:22:59 <NA> 0.645
## Unique (excld. NA) 3417 2 3741
## Missing values 0 0 208
## Sorted FALSE FALSE FALSE
##
## j.NH3.conv.fact dt.calc dt.diff ct mt cta
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.0296 0.5 -3.55e-15 0.5 0.25 -0.7
## Maximum 1 7.2 3.55e-15 203 202 203
## Mean 0.752 1.36 -1.96e-15 88.9 88.2 88.7
## Unique (excld. NA) 2 15 7 966 1024 965
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## bta flag.int rain.rate rain.cum wind.2m e.int
## Class numeric character numeric numeric numeric numeric
## Minimum -1.2 0 0 0.145 -0.0196
## Maximum 201 m i 2 1 7.74 12.5
## Mean 87.3 <NA> 0.00101 0.143 2.82 0.267
## Unique (excld. NA) 964 2 2 2 677 3869
## Missing values 0 0 0 0 2938 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum e e.rel j.rel pub.info soil.type2
## Class numeric numeric numeric numeric logical logical
## Minimum 0.000472 0.000472 6.99e-06 -0.000613 <NA> <NA>
## Maximum 56.4 56.4 0.881 0.0484 <NA> <NA>
## Mean 16.9 16.9 0.251 0.00207 <NA> <NA>
## Unique (excld. NA) 3949 3949 3949 3869 0 0
## Missing values 0 0 0 0 3949 3949
## Sorted FALSE FALSE FALSE FALSE <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig meas.tech2 crop.orig
## Class logical logical logical character character character
## Minimum <NA> <NA> FALSE bLS chamber Stubble
## Maximum <NA> <NA> FALSE Wind tunnel wt Stubble
## Mean <NA> <NA> 0 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 3 3 1
## Missing values 3949 3949 0 0 0 0
## Sorted <NA> <NA> TRUE FALSE FALSE TRUE
##
## man.source.orig app.method.orig app.method2
## Class character character character
## Minimum Mix Band spread or trailing hose bsth
## Maximum Mix Open slot injection os
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 2 2
## Missing values 0 0 0
## Sorted TRUE FALSE FALSE
##
## incorp.orig date.start first.row.int row.plot
## Class character Date numeric numeric
## Minimum None 2022-10-11 5 5
## Maximum None 2022-10-11 3620 41
## Mean <NA> <NA> 1890 29.3
## Unique (excld. NA) 1 1 37 37
## Missing values 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE
##
## first.rows ggplotgroup
## Class factor factor
## Minimum Plots 10 Emis. 211 (4.96,10.1]
## Maximum Plots 9 Emis. 185 (35.9,41]
## Mean Plots 30 Emis. 1664 (25.6,30.7]
## Unique (excld. NA) 37 7
## Missing values 0 0
## Sorted FALSE FALSE
##