Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:51:43.685589"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU | Jesper Nørlem Kamp | 1 | 2022-03-11 |
2. Contributors
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## OKMissing or double interval number
## [1] "Problem, see following rows"
## [1] 96
##
## head() of problem rows:
## row.in.file.int plot interval t.start
## 91 95 1 91 2021-08-11 15:00:00
## 92 96 1 92 2021-08-11 15:30:00
## 93 97 1 92 2021-08-11 16:00:00
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| bLS | 1796 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 1796 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| ug NH3/m2/s | 0.0296079 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : OK
## soil.temp.surf : OK
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : OK
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## pub.id meas.tech.det silt sand oc
## 1796 1796 378 378 1418
## soil.type soil.water.v soil.moist soil.ph man.source.det
## 1796 1796 1418 468 378
## man.bed man.trt2 man.trt3 man.stor man.vs
## 1796 1796 1796 1796 1796
## man.tic man.ua man.vfa time.incorp man.area
## 1796 1796 378 1796 934
## dist.inj furrow.z furrow.w crop.area lai
## 1796 1796 1796 1796 1796
## notes.plot bg.dl bg.val bg.unit pH.surf
## 1330 1796 1704 1796 1796
## soil.temp soil.temp.z soil.temp.surf rad MOL
## 378 378 378 378 5
## ustar rl air.pres.unit rh far.loc
## 5 11 467 378 378
## notes.int pub.info soil.type2 exper2 rep2
## 1412 1796 1796 1796 1796Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
| institute | proj | exper | field | plot | man.dm | man.ph | man.tan | app.rate | tan.app |
|---|---|---|---|---|---|---|---|---|---|
| AU | eGylle | eGylle1 | FoulumgårdD | 1 | 5.31 | 7.7 | 1.900 | 35.9 | 68.210 |
| AU | eGylle | eGylle2 | FoulumgårdD | 1 | 4.95 | 7.9 | 1.950 | 35.9 | 70.005 |
| AU | eGylle | eGylle3 | WUR | 1 | 6.78 | 7.7 | 1.726 | 17.5 | 30.205 |
| AU | eGylle | eGylle4 | FoulumgårdD | 1 | 4.47 | 7.9 | 1.720 | 35.9 | 61.748 |
10. dfsumm summary
Plot-level data
##
## 4 rows and 224 columns
## 4 unique rows
## pub.id
## Class logical
## Minimum <NA>
## Maximum <NA>
## Mean <NA>
## Unique (excld. NA) 0
## Missing values 4
## Sorted <NA>
##
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle1.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2021-08-11 16:20:00.M:bLSNA
## Maximum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle4.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2022-01-05 14:23:00.M:bLSNA
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep plot.area
## Class character character character numeric numeric numeric
## Minimum eGylle eGylle1 FoulumgårdD 1 1 336
## Maximum eGylle eGylle4 WUR 1 1 1540
## Mean <NA> <NA> <NA> 1 1 811
## Unique (excld. NA) 1 4 2 1 1 4
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE FALSE TRUE TRUE FALSE
##
## lat long country topo clay silt sand
## Class numeric numeric character character numeric numeric numeric
## Minimum 52 5.65 DK Flat 9 24 65
## Maximum 56.5 9.56 NL Flat 16 24 65
## Mean 55.4 8.58 <NA> <NA> 10.8 24 65
## Unique (excld. NA) 2 2 2 1 2 1 1
## Missing values 0 0 0 0 0 1 1
## Sorted FALSE FALSE FALSE TRUE FALSE TRUE TRUE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class numeric logical numeric logical character numeric
## Minimum 3.5 <NA> 0.21 <NA> wet 5.24
## Maximum 3.5 <NA> 0.49 <NA> wet 5.55
## Mean 3.5 <NA> 0.3 <NA> <NA> 5.43
## Unique (excld. NA) 1 0 3 0 1 3
## Missing values 3 4 0 4 3 1
## Sorted TRUE <NA> FALSE <NA> TRUE FALSE
##
## soil.dens crop.res till man.source
## Class numeric character character character
## Minimum 0.98 Yes No cat
## Maximum 1.38 Yes No mix
## Mean 1.28 <NA> <NA> <NA>
## Unique (excld. NA) 2 1 1 2
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## man.source.det
## Class character
## Minimum Primarily cattle slurry, but also some pig slurry and silage
## Maximum Primarily cattle slurry, but also some pig slurry and silage
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 1
## Sorted TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 4 0 0 4 4
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 4.47 <NA> 2.49 1.72 <NA> <NA>
## Maximum <NA> 6.78 <NA> 3.48 1.95 <NA> <NA>
## Mean <NA> 5.38 <NA> 2.89 1.82 <NA> <NA>
## Unique (excld. NA) 0 4 0 3 4 0 0
## Missing values 4 0 4 0 0 4 4
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 0.16 7.7 2021-08-11 16:20:00 2021-08-11 16:20:00
## Maximum 0.51 7.9 2022-01-05 14:23:00 2022-01-05 14:23:00
## Mean 0.323 7.8 2021-10-12 00:59:00 2021-10-12 01:00:15
## Unique (excld. NA) 3 2 4 4
## Missing values 1 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 17.5 t/ha none <NA>
## Maximum os 35.9 t/ha none <NA>
## Mean <NA> 31.3 <NA> <NA> <NA>
## Unique (excld. NA) 2 2 1 1 0
## Missing values 0 0 0 0 4
## Sorted FALSE FALSE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class numeric logical logical logical character numeric
## Minimum 27 <NA> <NA> <NA> grass 7
## Maximum 40 <NA> <NA> <NA> stubble 7.6
## Mean 33.5 <NA> <NA> <NA> <NA> 7.15
## Unique (excld. NA) 2 0 0 0 2 2
## Missing values 2 4 4 4 0 0
## Sorted FALSE <NA> <NA> <NA> FALSE FALSE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 8 AU
## Mean <NA> <NA> <NA> 6.5 <NA>
## Unique (excld. NA) 0 0 1 4 1
## Missing values 4 4 3 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det app.start.orig
## Class character character logical character
## Minimum eGylle_bLS bLS <NA> 09/11/2021 10:15
## Maximum eGylle_bLS bLS <NA> 5/01/2022 14:23
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 4
## Missing values 0 0 4 0
## Sorted TRUE TRUE <NA> FALSE
##
## app.end.orig
## Class character
## Minimum 09/11/2021 10:20
## Maximum 5/01/2022 14:23
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle1.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2021-08-11 16:20:00
## Maximum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle4.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2022-01-05 14:23:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:AU.Pr:eGylle.E:eGylle1 Jesper Nørlem Kamp
## Maximum D:1.I:AU.Pr:eGylle.E:eGylle4 Jesper Nørlem Kamp
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 4 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app e.1 e.4 e.6 e.12 e.24 e.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 30.2 -0.00214 -0.00248 -0.00484 -0.0127 0.00935 2.26
## Maximum 70 0.00235 4.65 10.8 20.2 22.6 27.1
## Mean 57.5 0.000324 1.16 2.7 5.06 5.97 10.3
## Unique (excld. NA) 4 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.72 e.96 e.168 e.final e.tot e.cum.1 e.cum.4
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 2.81 3.36 3.83 3.88 3.88 -0.00214 -0.00248
## Maximum 30.8 32.3 34.8 35.9 35.9 0.00235 4.65
## Mean 14.1 15.4 16.7 17.2 17.2 0.000324 1.16
## Unique (excld. NA) 4 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.6 e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.00484 -0.0127 0.00935 2.26 2.81 3.36
## Maximum 10.8 20.2 22.6 27.1 30.8 32.3
## Mean 2.7 5.06 5.97 10.3 14.1 15.4
## Unique (excld. NA) 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.168 e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 3.83 3.88 3.88 -3.13e-05 -8.21e-05 -0.00016
## Maximum 34.8 35.9 35.9 3.36e-05 0.0664 0.154
## Mean 16.7 17.2 17.2 9.79e-07 0.0166 0.0385
## Unique (excld. NA) 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.12 e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.000421 0.000137 0.0662 0.0931 0.111 0.127
## Maximum 0.289 0.323 0.387 0.44 0.462 0.497
## Mean 0.0723 0.09 0.161 0.221 0.242 0.263
## Unique (excld. NA) 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.final e.rel.tot rain.1 rain.4 rain.6 rain.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.128 0.128 0 0 0 0
## Maximum 0.512 0.512 0 0.5 0.5 0.8
## Mean 0.271 0.271 0 0.125 0.125 0.2
## Unique (excld. NA) 4 4 1 2 2 2
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE TRUE TRUE TRUE TRUE
##
## rain.24 rain.48 rain.72 rain.96 rain.168 rain.final rain.tot
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 0 0 0.5 0.6 0.6
## Maximum 4.3 5.3 5.5 8.2 24.6 29.8 29.8
## Mean 2.12 2.4 2.78 3.53 11.4 13.4 13.4
## Unique (excld. NA) 4 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## air.temp.1 air.temp.4 air.temp.6 air.temp.12 air.temp.24
## Class numeric numeric numeric numeric numeric
## Minimum 2.9 2.22 1.98 1.77 1.77
## Maximum 18.8 17.2 16.1 15.9 15.2
## Mean 11.3 10.9 10.5 9.66 9.32
## Unique (excld. NA) 4 4 4 4 4
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## air.temp.48 air.temp.72 air.temp.96 air.temp.168 air.temp.mn
## Class numeric numeric numeric numeric numeric
## Minimum 0.466 0.795 0.934 1.08 3.36
## Maximum 15.3 15.9 16.3 15.7 21.3
## Mean 8.96 9.31 9.56 9.74 13.5
## Unique (excld. NA) 4 4 4 4 4
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## soil.temp.1 soil.temp.4 soil.temp.6 soil.temp.12
## Class numeric numeric numeric numeric
## Minimum 5.2 5.14 5.11 4.95
## Maximum 16.9 17 16.9 16.6
## Mean 12.3 12.3 12.3 12.3
## Unique (excld. NA) 3 3 3 3
## Missing values 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE
##
## soil.temp.24 soil.temp.48 soil.temp.72 soil.temp.96
## Class numeric numeric numeric numeric
## Minimum 4.7 4.21 3.67 3.48
## Maximum 16.4 16.4 16.5 16.6
## Mean 12.1 11.9 11.8 11.8
## Unique (excld. NA) 3 3 3 3
## Missing values 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE
##
## soil.temp.168 soil.temp.mn soil.temp.surf.1 soil.temp.surf.4
## Class numeric numeric numeric numeric
## Minimum 3.22 4.83 2.62 1.72
## Maximum 16.6 22.6 19.2 16.6
## Mean 11.7 16.6 11.9 11.4
## Unique (excld. NA) 3 3 3 3
## Missing values 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE
##
## soil.temp.surf.6 soil.temp.surf.12 soil.temp.surf.24
## Class numeric numeric numeric
## Minimum 1.37 1.13 1.34
## Maximum 16.2 16.5 15.2
## Mean 10.9 10.4 9.91
## Unique (excld. NA) 3 3 3
## Missing values 1 1 1
## Sorted FALSE FALSE FALSE
##
## soil.temp.surf.48 soil.temp.surf.72 soil.temp.surf.96
## Class numeric numeric numeric
## Minimum -0.581 -0.0816 0.131
## Maximum 15.3 15.8 16.1
## Mean 9.25 9.6 9.99
## Unique (excld. NA) 3 3 3
## Missing values 1 1 1
## Sorted FALSE FALSE FALSE
##
## soil.temp.surf.168 soil.temp.surf.mn wind.1 wind.4 wind.6
## Class numeric numeric numeric numeric numeric
## Minimum 0.453 2.59 1.03 0.72 0.764
## Maximum 15.6 21.1 2.22 2.54 2.61
## Mean 10.1 14.9 1.84 1.69 1.7
## Unique (excld. NA) 3 3 4 4 4
## Missing values 1 1 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.12 wind.24 wind.48 wind.72 wind.96 wind.168 wind.mn
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.823 1.31 1.29 1.25 1.29 1.65 1.8
## Maximum 2.87 2.7 2.06 2.24 2.27 2.38 3.88
## Mean 1.88 1.84 1.56 1.57 1.63 1.98 3
## Unique (excld. NA) 4 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12 wind.2m.24
## Class numeric numeric numeric numeric numeric
## Minimum 1.03 0.72 0.764 0.823 1.31
## Maximum 2.22 2.54 2.61 2.87 2.7
## Mean 1.84 1.69 1.7 1.88 1.84
## Unique (excld. NA) 4 4 4 4 4
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168 wind.2m.mn
## Class numeric numeric numeric numeric numeric
## Minimum 1.29 1.25 1.29 1.65 1.8
## Maximum 2.06 2.24 2.27 2.38 3.88
## Mean 1.56 1.57 1.63 1.98 3
## Unique (excld. NA) 4 4 4 4 4
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## rad.1 rad.4 rad.6 rad.12 rad.24 rad.48 rad.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 65.6 20.6 13.7 6.91 15.8 26.1 23.3
## Maximum 200 324 321 321 171 169 184
## Mean 154 142 130 119 107 121 124
## Unique (excld. NA) 3 3 3 3 3 3 3
## Missing values 1 1 1 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## rad.96 rad.168 rad.mn rain.rate.1 rain.rate.4 rain.rate.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 22.2 18.1 24 0 0 0
## Maximum 198 176 222 0 0.125 0.0833
## Mean 127 115 150 0 0.0312 0.0208
## Unique (excld. NA) 3 3 3 1 2 2
## Missing values 1 1 1 0 0 0
## Sorted FALSE FALSE FALSE TRUE TRUE TRUE
##
## rain.rate.12 rain.rate.24 rain.rate.48 rain.rate.72
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0.0667 0.179 0.11 0.0764
## Mean 0.0167 0.0885 0.05 0.0385
## Unique (excld. NA) 2 4 4 4
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE FALSE
##
## rain.rate.96 rain.rate.168 rain.rate.mn rh.1 rh.4
## Class numeric numeric numeric numeric numeric
## Minimum 0 0.00298 0.00357 60.5 68.1
## Maximum 0.0854 0.146 0.177 84 87
## Mean 0.0367 0.068 0.0798 74.9 75.9
## Unique (excld. NA) 4 4 4 3 3
## Missing values 0 0 0 1 1
## Sorted FALSE FALSE FALSE TRUE TRUE
##
## rh.6 rh.12 rh.24 rh.48 rh.72 rh.96 rh.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 70.2 65.1 75 74.8 74.8 74.5 73.8
## Maximum 87.6 87.9 90.2 86.2 87.2 88.4 89.8
## Mean 77 78.1 82.8 81.4 81.2 81.2 81.5
## Unique (excld. NA) 3 3 3 3 3 3 3
## Missing values 1 1 1 1 1 1 1
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## rh.mn first.row.in.file.int last.row.in.file.int n.ints
## Class numeric numeric numeric integer
## Minimum 110 5 470 378
## Maximum 125 1330 1800 484
## Mean 116 691 1140 449
## Unique (excld. NA) 3 4 4 4
## Missing values 1 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## dt1 j.rel1 j.NH31 dt.min dt.max ct.min ct.max
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.5 -4.15e-05 -0.00283 0.167 0.5 0.5 189
## Maximum 0.5 3.51e-05 0.00245 0.5 0.5 0.5 242
## Mean 0.5 9.7e-07 0.000218 0.417 0.5 0.5 224
## Unique (excld. NA) 1 4 4 2 1 1 4
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE TRUE TRUE TRUE FALSE
##
## t.start.p t.end.p air.temp.z
## Class POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 2021-08-09 18:00:00 2021-08-19 10:00:00 2
## Maximum 2022-01-04 15:00:00 2022-01-14 08:30:00 2
## Mean 2021-10-11 02:22:30 2021-10-20 10:15:00 2
## Unique (excld. NA) 4 4 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## soil.temp.z wind.z wind.loc far.loc pub.info soil.type2
## Class numeric numeric character numeric logical logical
## Minimum 0.1 2 Field 5000 <NA> <NA>
## Maximum 0.1 2 Field 5000 <NA> <NA>
## Mean 0.1 2 <NA> 5000 <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0 0
## Missing values 1 0 0 1 4 4
## Sorted TRUE TRUE TRUE TRUE <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig meas.tech2 crop.orig
## Class logical logical logical character character character
## Minimum <NA> <NA> FALSE bLS micro met Grass
## Maximum <NA> <NA> FALSE bLS micro met Stubble
## Mean <NA> <NA> 0 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 1 1 2
## Missing values 4 4 0 0 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE FALSE
##
## man.source.orig app.method.orig app.method2
## Class character character character
## Minimum Cattle Band spread or trailing hose bsth
## Maximum Mix Open slot injection os
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 2 2 2
## Missing values 0 0 0
## Sorted FALSE FALSE FALSE
##
## incorp.orig date.start
## Class character Date
## Minimum None 2021-08-09
## Maximum None 2022-01-04
## Mean <NA> <NA>
## Unique (excld. NA) 1 4
## Missing values 0 0
## Sorted TRUE TRUE
## Interval-level emission data
##
## 1796 rows and 137 columns
## 1796 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle1.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2021-08-11 16:20:00.M:bLSNA
## Maximum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle4.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2022-01-05 14:23:00.M:bLSNA
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class logical character character character numeric numeric
## Minimum <NA> eGylle eGylle1 FoulumgårdD 1 1
## Maximum <NA> eGylle eGylle4 WUR 1 1
## Mean <NA> <NA> <NA> <NA> 1 1
## Unique (excld. NA) 0 1 4 2 1 1
## Missing values 1796 0 0 0 0 0
## Sorted <NA> TRUE TRUE FALSE TRUE TRUE
##
## treat meas.tech meas.tech.det plot.area lat long
## Class character character logical numeric numeric numeric
## Minimum eGylle_bLS bLS <NA> 336 52 5.65
## Maximum eGylle_bLS bLS <NA> 1540 56.5 9.56
## Mean <NA> <NA> <NA> 775 55.5 8.74
## Unique (excld. NA) 1 1 0 4 2 2
## Missing values 0 0 1796 0 0 0
## Sorted TRUE TRUE <NA> FALSE FALSE FALSE
##
## country topo clay silt sand oc
## Class character character numeric numeric numeric numeric
## Minimum DK Flat 9 24 65 3.5
## Maximum NL Flat 16 24 65 3.5
## Mean <NA> <NA> 10.5 24 65 3.5
## Unique (excld. NA) 2 1 2 1 1 1
## Missing values 0 0 0 378 378 1418
## Sorted FALSE TRUE FALSE TRUE TRUE TRUE
##
## soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical numeric logical character numeric
## Minimum <NA> 0.21 <NA> wet 5.24
## Maximum <NA> 0.49 <NA> wet 5.55
## Mean <NA> 0.29 <NA> <NA> 5.42
## Unique (excld. NA) 0 3 0 1 3
## Missing values 1796 0 1796 1418 468
## Sorted <NA> FALSE <NA> TRUE FALSE
##
## soil.dens crop.res till man.source
## Class numeric character character character
## Minimum 0.98 Yes No cat
## Maximum 1.38 Yes No mix
## Mean 1.3 <NA> <NA> <NA>
## Unique (excld. NA) 2 1 1 2
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE FALSE
##
## man.source.det
## Class character
## Minimum Primarily cattle slurry, but also some pig slurry and silage
## Maximum Primarily cattle slurry, but also some pig slurry and silage
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 378
## Sorted TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry None <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 2 0 0
## Missing values 1796 0 0 1796 1796
## Sorted <NA> TRUE FALSE <NA> <NA>
##
## man.stor man.dm man.vs man.tkn man.tan man.tic man.ua
## Class logical numeric logical numeric numeric logical logical
## Minimum <NA> 4.47 <NA> 2.49 1.72 <NA> <NA>
## Maximum <NA> 6.78 <NA> 3.48 1.95 <NA> <NA>
## Mean <NA> 5.3 <NA> 2.86 1.83 <NA> <NA>
## Unique (excld. NA) 0 4 0 3 4 0 0
## Missing values 1796 0 1796 0 0 1796 1796
## Sorted <NA> FALSE <NA> FALSE FALSE <NA> <NA>
##
## man.vfa man.ph app.start app.end
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 0.16 7.7 2021-08-11 16:20:00 2021-08-11 16:20:00
## Maximum 0.51 7.9 2022-01-05 14:23:00 2022-01-05 14:23:00
## Mean 0.323 7.81 2021-10-10 05:14:28 2021-10-10 05:15:31
## Unique (excld. NA) 3 2 4 4
## Missing values 378 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## app.method app.rate app.rate.unit incorp time.incorp
## Class character numeric character character numeric
## Minimum bsth 17.5 t/ha none <NA>
## Maximum os 35.9 t/ha none <NA>
## Mean <NA> 32 <NA> <NA> <NA>
## Unique (excld. NA) 2 2 1 1 0
## Missing values 0 0 0 0 1796
## Sorted FALSE FALSE TRUE TRUE <NA>
##
## man.area dist.inj furrow.z furrow.w crop crop.z
## Class numeric logical logical logical character numeric
## Minimum 27 <NA> <NA> <NA> grass 7
## Maximum 40 <NA> <NA> <NA> stubble 7.6
## Mean 34.3 <NA> <NA> <NA> <NA> 7.13
## Unique (excld. NA) 2 0 0 0 2 2
## Missing values 934 1796 1796 1796 0 0
## Sorted FALSE <NA> <NA> <NA> FALSE FALSE
##
## crop.area lai notes.plot row.in.file.plot institute
## Class numeric logical character numeric character
## Minimum <NA> <NA> . 5 AU
## Maximum <NA> <NA> . 8 AU
## Mean <NA> <NA> <NA> 6.47 <NA>
## Unique (excld. NA) 0 0 1 4 1
## Missing values 1796 1796 1330 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 09/11/2021 10:15 09/11/2021 10:20
## Maximum 5/01/2022 14:23 5/01/2022 14:23
## Mean <NA> <NA>
## Unique (excld. NA) 4 4
## Missing values 0 0
## Sorted FALSE FALSE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle1.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2021-08-11 16:20:00
## Maximum D:1.I:AU.Pr:eGylle.F:../../data-submitted/03/AU/ALFAM2_template_6_1_eGylle_JK_3.xlsx.E:eGylle4.F:FoulumgårdD.P:1.T:eGylle_bLS.R:1.R2:.T:2022-01-05 14:23:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter
## Class character character character
## Minimum D:1.I:AU.Pr:eGylle.E:eGylle1 Jesper Nørlem Kamp
## Maximum D:1.I:AU.Pr:eGylle.E:eGylle4 Jesper Nørlem Kamp
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 4 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## tan.app interval t.start t.end
## Class numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 30.2 1 2021-08-09 18:00:00 2021-08-09 18:30:00
## Maximum 70 484 2022-01-14 08:30:00 2022-01-14 09:00:00
## Mean 59 227 2021-10-13 23:26:59 2021-10-13 23:56:58
## Unique (excld. NA) 4 484 1796 1796
## Missing values 0 0 0 0
## Sorted FALSE FALSE TRUE TRUE
##
## dt bg.dl bg.val bg.unit j.NH3 j.NH3.unit pH.surf
## Class numeric logical numeric logical numeric character logical
## Minimum 0.167 <NA> -0.752 <NA> -0.0223 kg N/ha-hr <NA>
## Maximum 0.5 <NA> 0.746 <NA> 5.11 kg N/ha-hr <NA>
## Mean 0.5 <NA> 0.0261 <NA> 0.0775 <NA> <NA>
## Unique (excld. NA) 3 0 92 0 1796 1 0
## Missing values 0 1796 1704 1796 0 0 1796
## Sorted FALSE <NA> FALSE <NA> FALSE TRUE <NA>
##
## air.temp air.temp.z soil.temp soil.temp.z soil.temp.surf
## Class numeric numeric numeric numeric numeric
## Minimum -3.4 2 2.5 0.1 -6.7
## Maximum 22.3 2 17.6 0.1 24.6
## Mean 10.1 2 11.8 0.1 10.6
## Unique (excld. NA) 791 1 141 1 482
## Missing values 0 0 378 378 378
## Sorted FALSE TRUE FALSE TRUE FALSE
##
## rad wind wind.z MOL ustar rl air.pres
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0.0765 2 -18700 0.00858 4.51e-08 974
## Maximum 784 7.49 2 67700 0.856 0.714 104000
## Mean 107 2.25 2 95.7 0.22 0.0397 22500
## Unique (excld. NA) 749 1792 1 1673 1790 1744 1004
## Missing values 378 0 0 5 5 11 0
## Sorted FALSE FALSE TRUE FALSE FALSE FALSE FALSE
##
## air.pres.unit rain rh wind.loc far.loc
## Class character numeric numeric character numeric
## Minimum hPa 0 45.1 Field 5000
## Maximum Pa 4.2 96.3 Field 5000
## Mean <NA> 0.0298 82.3 <NA> 5000
## Unique (excld. NA) 2 21 617 1 1
## Missing values 467 0 378 0 378
## Sorted FALSE FALSE FALSE TRUE TRUE
##
## notes.int row.in.file.int
## Class character numeric
## Minimum Interpolated emission rate value 5
## Maximum Interpolated emission rate value 1800
## Mean <NA> 902
## Unique (excld. NA) 1 1796
## Missing values 1412 0
## Sorted TRUE TRUE
##
## j.type t.start.orig t.end.orig j.NH3.unit.orig
## Class character character character character
## Minimum emission rate 10/1/2022 0:00 10/1/2022 0:00 ug NH3/m2/s
## Maximum emission rate 9/8/2021 23:30 9/8/2021 23:30 ug NH3/m2/s
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1796 1796 1
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE TRUE
##
## j.NH3.orig j.NH3.conv.fact dt.calc dt.diff ct mt
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.752 0.0296 0.167 -3.33e-16 0.5 0.25
## Maximum 173 0.0296 0.5 3.33e-16 242 242
## Mean 2.62 0.0296 0.5 0 113 113
## Unique (excld. NA) 1796 1 3 3 485 486
## Missing values 0 0 0 0 0 0
## Sorted FALSE TRUE FALSE FALSE FALSE FALSE
##
## cta bta flag.int rain.rate rain.cum wind.2m e.int
## Class numeric numeric character numeric numeric numeric numeric
## Minimum -45.8 -46.3 0 0 0.0765 -0.0111
## Maximum 239 239 8.4 29.8 7.49 2.56
## Mean 90.7 90.2 <NA> 0.0597 6.71 2.25 0.0383
## Unique (excld. NA) 1796 1796 1 21 89 1792 1796
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE TRUE FALSE FALSE FALSE FALSE
##
## e.cum e e.rel j.rel pub.info soil.type2
## Class numeric numeric numeric numeric logical logical
## Minimum -0.0161 -0.0161 -0.000533 -0.000327 <NA> <NA>
## Maximum 35.9 35.9 0.512 0.0731 <NA> <NA>
## Mean 14.5 14.5 0.223 0.00122 <NA> <NA>
## Unique (excld. NA) 1796 1796 1796 1796 0 0
## Missing values 0 0 0 0 1796 1796
## Sorted FALSE FALSE FALSE FALSE <NA> <NA>
##
## exper2 rep2 acid meas.tech.orig meas.tech2 crop.orig
## Class logical logical logical character character character
## Minimum <NA> <NA> FALSE bLS micro met Grass
## Maximum <NA> <NA> FALSE bLS micro met Stubble
## Mean <NA> <NA> 0 TRUE <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 1 1 2
## Missing values 1796 1796 0 0 0 0
## Sorted <NA> <NA> TRUE TRUE TRUE FALSE
##
## man.source.orig app.method.orig app.method2
## Class character character character
## Minimum Cattle Band spread or trailing hose bsth
## Maximum Mix Open slot injection os
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 2 2 2
## Missing values 0 0 0
## Sorted FALSE FALSE FALSE
##
## incorp.orig date.start first.row.int row.plot
## Class character Date numeric numeric
## Minimum None 2021-08-09 5 5
## Maximum None 2021-08-09 1330 8
## Mean <NA> <NA> 677 6.47
## Unique (excld. NA) 1 1 4 4
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## first.rows ggplotgroup
## Class factor numeric
## Minimum Plots 5 Emis. 5 1
## Maximum Plots 8 Emis. 1333 1
## Mean Plots 6 Emis. 471 1
## Unique (excld. NA) 4 1
## Missing values 0 0
## Sorted TRUE TRUE
##