Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:47:52.57579"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU | Jesper Nørlem Kamp | 1 | 2021-09-21 |
2. Contributors
| contributor | institute |
|---|---|
| Kamp, Jesper Nørlem | Aarhus University |
| Häni, Christoph | Bern University of Applied Sciences |
| Nyord, Tavs | Aarhus University |
| Feilberg, Anders | Aarhus University |
| Sørensen, Lise Lotte | Aarhus University |
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## OK## OKComplete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## Warning: 1 hour or longer delay after starting application
## bta = elapsed (cumulative) time since manure application *began*
## ct = elapsed time of measurements
## cta = elapsed time since application ended
## First 10 rows| row.in.file.int | app.start | t.start | bta | ct | cta |
|---|---|---|---|---|---|
| 971 | 2019-08-14 06:00:00 | 2019-08-14 17:30:00 | 11.5 | 0.5 | 12.0 |
| 972 | 2019-08-14 06:00:00 | 2019-08-14 18:00:00 | 12.0 | 1.0 | 12.5 |
| 973 | 2019-08-14 06:00:00 | 2019-08-14 18:30:00 | 12.5 | 1.5 | 13.0 |
| 974 | 2019-08-14 06:00:00 | 2019-08-14 19:00:00 | 13.0 | 2.0 | 13.5 |
| 975 | 2019-08-14 06:00:00 | 2019-08-14 19:30:00 | 13.5 | 2.5 | 14.0 |
| 976 | 2019-08-14 06:00:00 | 2019-08-14 20:00:00 | 14.0 | 3.0 | 14.5 |
| 977 | 2019-08-14 06:00:00 | 2019-08-14 20:30:00 | 14.5 | 3.5 | 15.0 |
| 978 | 2019-08-14 06:00:00 | 2019-08-14 21:00:00 | 15.0 | 4.0 | 15.5 |
| 979 | 2019-08-14 06:00:00 | 2019-08-14 21:30:00 | 15.5 | 4.5 | 16.0 |
| 980 | 2019-08-14 06:00:00 | 2019-08-14 22:00:00 | 16.0 | 5.0 | 16.5 |
Missing or double interval number
## OK
## OK
## OK
## OKMissing time between intervals
## OK
## OK
## OK
## OKMeasurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| AGM | 321 |
| bLS | 963 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 1284 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| µg NH3/m2/s | 0.0296079 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : OK
## soil.temp.surf : OK
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : OK
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## meas.tech.det clay silt sand oc
## 321 1284 1284 1284 1284
## soil.water soil.water.v soil.moist soil.ph soil.dens
## 1284 1284 1284 1284 1284
## man.source.det man.bed man.trt2 man.stor man.vs
## 1284 1284 1284 1284 1284
## man.tic man.ua man.vfa incorp time.incorp
## 1284 1284 1284 1284 1284
## man.area furrow.w crop.area lai man.trt3
## 1284 1284 1284 1284 1284
## bg.dl bg.val bg.unit pH.surf MOL
## 1284 1284 1284 1284 4
## ustar rl far.loc notes.int j.NH3.orig
## 4 4 1284 1283 350
## soil.type2 exper2 rep2 incorp.orig
## 1284 1284 1284 1284Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
| institute | proj | exper | field | plot | man.dm | man.ph | man.tan | app.rate | tan.app |
|---|---|---|---|---|---|---|---|---|---|
| AU | Vejrumbro_2019 | Vejrumbro_2019_Aug | 1 | 3.31 | 7.7 | 1.62 | 35 | 56.7 | |
| AU | Vejrumbro_2019 | Vejrumbro_2019_Aug | 1 | 3.31 | 7.7 | 1.62 | 35 | 56.7 | |
| AU | Vejrumbro_2019 | Vejrumbro_2019_Aug | 1 | 3.31 | 7.7 | 1.62 | 35 | 56.7 | |
| AU | Vejrumbro_2019 | Vejrumbro_2019_Aug | 1 | 3.31 | 7.7 | 1.62 | 35 | 56.7 |
10. dfsumm summary
Plot-level data
##
## 4 rows and 224 columns
## 4 unique rows
## pub.id
## Class character
## Minimum Atmos1
## Maximum Atmos1
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:AGM.R:1.R2:.T:2019-08-14 06:00:00.M:AGMNA
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:MD.R:1.R2:.T:2019-08-14 06:00:00.M:bLSMD
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep
## Class character character character numeric numeric
## Minimum Vejrumbro_2019 Vejrumbro_2019_Aug 1 1
## Maximum Vejrumbro_2019 Vejrumbro_2019_Aug 1 1
## Mean <NA> <NA> <NA> 1 1
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## plot.area lat long country topo clay
## Class numeric numeric numeric character character logical
## Minimum 260000 56.5 9.54 DK Flat <NA>
## Maximum 260000 56.5 9.54 DK Flat <NA>
## Mean 260000 56.5 9.54 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 1 0
## Missing values 0 0 0 0 0 4
## Sorted TRUE TRUE TRUE TRUE TRUE <NA>
##
## silt sand oc soil.type soil.water soil.water.v
## Class logical logical logical character logical logical
## Minimum <NA> <NA> <NA> Loam <NA> <NA>
## Maximum <NA> <NA> <NA> Loam <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 1 0 0
## Missing values 4 4 4 0 4 4
## Sorted <NA> <NA> <NA> TRUE <NA> <NA>
##
## soil.moist soil.ph soil.dens crop.res till man.source
## Class logical logical logical character character character
## Minimum <NA> <NA> <NA> No No mix
## Maximum <NA> <NA> <NA> No No mix
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 0 1 1 1
## Missing values 4 4 4 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## man.source.det man.bed man.con man.trt1
## Class logical logical character character
## Minimum <NA> <NA> Slurry Anaerobic digestion
## Maximum <NA> <NA> Slurry Anaerobic digestion
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 0 1 1
## Missing values 4 4 0 0
## Sorted <NA> <NA> TRUE TRUE
##
## man.trt2 man.stor man.dm man.vs man.tkn man.tan man.tic
## Class logical logical numeric logical numeric numeric logical
## Minimum <NA> <NA> 3.31 <NA> 2.79 1.62 <NA>
## Maximum <NA> <NA> 3.31 <NA> 2.79 1.62 <NA>
## Mean <NA> <NA> 3.31 <NA> 2.79 1.62 <NA>
## Unique (excld. NA) 0 0 1 0 1 1 0
## Missing values 4 4 0 4 0 0 4
## Sorted <NA> <NA> TRUE <NA> TRUE TRUE <NA>
##
## man.ua man.vfa man.ph app.start
## Class logical logical numeric POSIXct, POSIXt
## Minimum <NA> <NA> 7.7 2019-08-14 06:00:00
## Maximum <NA> <NA> 7.7 2019-08-14 06:00:00
## Mean <NA> <NA> 7.7 2019-08-14 06:00:00
## Unique (excld. NA) 0 0 1 1
## Missing values 4 4 0 0
## Sorted <NA> <NA> TRUE TRUE
##
## app.end app.method app.rate app.rate.unit
## Class POSIXct, POSIXt character numeric character
## Minimum 2019-08-14 16:00:00 os 35 t/ha
## Maximum 2019-08-14 16:00:00 os 35 t/ha
## Mean 2019-08-14 16:00:00 <NA> 35 <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## incorp time.incorp man.area dist.inj furrow.z furrow.w
## Class character numeric logical numeric numeric logical
## Minimum <NA> <NA> <NA> 17 4 <NA>
## Maximum <NA> <NA> <NA> 17 4 <NA>
## Mean <NA> <NA> <NA> 17 4 <NA>
## Unique (excld. NA) 0 0 0 1 1 0
## Missing values 4 4 4 0 0 4
## Sorted <NA> <NA> <NA> TRUE TRUE <NA>
##
## crop crop.z crop.area lai notes.plot
## Class character numeric numeric logical character
## Minimum grass 15 <NA> <NA> .
## Maximum grass 15 <NA> <NA> .
## Mean <NA> 15 <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 1
## Missing values 0 0 4 4 0
## Sorted TRUE TRUE <NA> <NA> TRUE
##
## row.in.file.plot man.trt3 institute sub.period
## Class numeric logical character numeric
## Minimum 5 <NA> AU 3
## Maximum 5 <NA> AU 3
## Mean 5 <NA> <NA> 3
## Unique (excld. NA) 1 0 1 1
## Missing values 0 4 0 0
## Sorted TRUE <NA> TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det app.start.orig
## Class character character character character
## Minimum AGM AGM CRDS_1m 14-08-2019 06:00
## Maximum MD bLS MD 14-08-2019 06:00
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 4 2 3 1
## Missing values 0 0 1 0
## Sorted TRUE TRUE TRUE TRUE
##
## app.end.orig
## Class character
## Minimum 14-08-2019 16:00
## Maximum 14-08-2019 16:00
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:AGM.R:1.R2:.T:2019-08-14 06:00:00
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:MD.R:1.R2:.T:2019-08-14 06:00:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.E:Vejrumbro_2019_Aug
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.E:Vejrumbro_2019_Aug
## Mean <NA> <NA>
## Unique (excld. NA) 1 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app e.1 e.4 e.6 e.12
## Class character numeric numeric numeric numeric numeric
## Minimum Jesper Nørlem Kamp 56.7 0.697 2.25 3.06 4.39
## Maximum Jesper Nørlem Kamp 56.7 1.04 3.45 4.77 8.63
## Mean <NA> 56.7 0.873 3.09 4.29 6.59
## Unique (excld. NA) 1 1 4 4 4 4
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE FALSE FALSE
##
## e.24 e.48 e.72 e.96 e.168 e.final e.tot
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 6.61 8.33 9.08 9.21 <NA> 9.36 9.36
## Maximum 12.6 14.3 15 15.4 <NA> 15.5 15.5
## Mean 9.81 11.5 12.3 12.5 <NA> 12.7 12.7
## Unique (excld. NA) 4 4 4 4 0 4 4
## Missing values 0 0 0 0 4 0 0
## Sorted FALSE FALSE FALSE FALSE <NA> FALSE FALSE
##
## e.cum.1 e.cum.4 e.cum.6 e.cum.12 e.cum.24 e.cum.48 e.cum.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.697 2.25 3.06 4.39 6.61 8.33 9.08
## Maximum 1.04 3.45 4.77 8.63 12.6 14.3 15
## Mean 0.873 3.09 4.29 6.59 9.81 11.5 12.3
## Unique (excld. NA) 4 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.cum.96 e.cum.168 e.cum.final e.cum.tot e.rel.1 e.rel.4
## Class numeric numeric numeric numeric numeric numeric
## Minimum 9.21 <NA> 9.36 9.36 0.0123 0.0397
## Maximum 15.4 <NA> 15.5 15.5 0.0184 0.0608
## Mean 12.5 <NA> 12.7 12.7 0.0154 0.0545
## Unique (excld. NA) 4 0 4 4 4 4
## Missing values 0 4 0 0 0 0
## Sorted FALSE <NA> FALSE FALSE FALSE FALSE
##
## e.rel.6 e.rel.12 e.rel.24 e.rel.48 e.rel.72 e.rel.96
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.054 0.0773 0.117 0.147 0.16 0.163
## Maximum 0.0842 0.152 0.222 0.252 0.265 0.271
## Mean 0.0757 0.116 0.173 0.203 0.217 0.221
## Unique (excld. NA) 4 4 4 4 4 4
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.rel.168 e.rel.final e.rel.tot rain.1 rain.4 rain.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum <NA> 0.165 0.165 0 0 0
## Maximum <NA> 0.274 0.274 0 0 0
## Mean <NA> 0.224 0.224 0 0 0
## Unique (excld. NA) 0 4 4 1 1 1
## Missing values 4 0 0 0 0 0
## Sorted <NA> FALSE FALSE TRUE TRUE TRUE
##
## rain.12 rain.24 rain.48 rain.72 rain.96 rain.168 rain.final
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1.4 1.4 3.2 17 28.6 <NA> 36.4
## Maximum 1.4 1.4 3.2 17 28.6 <NA> 36.4
## Mean 1.4 1.4 3.2 17 28.6 <NA> 36.4
## Unique (excld. NA) 1 1 1 1 1 0 1
## Missing values 0 0 0 0 0 4 0
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> TRUE
##
## rain.tot air.temp.1 air.temp.4 air.temp.6 air.temp.12
## Class numeric numeric numeric numeric numeric
## Minimum 36.4 16.3 14.7 14 13.2
## Maximum 36.4 16.3 14.7 14 13.2
## Mean 36.4 16.3 14.7 14 13.2
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## air.temp.24 air.temp.48 air.temp.72 air.temp.96 air.temp.168
## Class numeric numeric numeric numeric numeric
## Minimum 14.5 15.1 15.4 15.2 14.9
## Maximum 14.5 15.1 15.4 15.2 14.9
## Mean 14.5 15.1 15.4 15.2 14.9
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## air.temp.mn soil.temp.1 soil.temp.4 soil.temp.6 soil.temp.12
## Class numeric numeric numeric numeric numeric
## Minimum 14.9 17.8 17.7 17.6 17.2
## Maximum 14.9 17.8 17.7 17.6 17.2
## Mean 14.9 17.8 17.7 17.6 17.2
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## soil.temp.24 soil.temp.48 soil.temp.72 soil.temp.96
## Class numeric numeric numeric numeric
## Minimum 16.9 16.9 17 17
## Maximum 16.9 16.9 17 17
## Mean 16.9 16.9 17 17
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.168 soil.temp.mn soil.temp.surf.1 soil.temp.surf.4
## Class numeric numeric numeric numeric
## Minimum 16.9 16.9 16.7 14.3
## Maximum 16.9 16.9 16.7 14.3
## Mean 16.9 16.9 16.7 14.3
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## soil.temp.surf.6 soil.temp.surf.12 soil.temp.surf.24
## Class numeric numeric numeric
## Minimum 13.4 12.8 14.4
## Maximum 13.4 12.8 14.4
## Mean 13.4 12.8 14.4
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## soil.temp.surf.48 soil.temp.surf.72 soil.temp.surf.96
## Class numeric numeric numeric
## Minimum 15.2 15.4 15.3
## Maximum 15.2 15.4 15.3
## Mean 15.2 15.4 15.3
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## soil.temp.surf.168 soil.temp.surf.mn wind.1 wind.4 wind.6
## Class numeric numeric numeric numeric numeric
## Minimum 14.9 14.9 3.23 2.23 1.92
## Maximum 14.9 14.9 3.23 2.23 1.92
## Mean 14.9 14.9 3.23 2.23 1.92
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## wind.12 wind.24 wind.48 wind.72 wind.96 wind.168 wind.mn
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 1.71 2.76 2.82 3.23 2.98 3 3
## Maximum 1.71 2.76 2.82 3.23 2.98 3 3
## Mean 1.71 2.76 2.82 3.23 2.98 3 3
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12 wind.2m.24
## Class numeric numeric numeric numeric numeric
## Minimum 3.23 2.23 1.92 1.71 2.76
## Maximum 3.23 2.23 1.92 1.71 2.76
## Mean 3.23 2.23 1.92 1.71 2.76
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168 wind.2m.mn
## Class numeric numeric numeric numeric numeric
## Minimum 2.82 3.23 2.98 3 3
## Maximum 2.82 3.23 2.98 3 3
## Mean 2.82 3.23 2.98 3 3
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## rad.1 rad.4 rad.6 rad.12 rad.24 rad.48 rad.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 144 60.6 40.4 20.5 101 123 123
## Maximum 144 60.6 40.4 20.5 101 123 123
## Mean 144 60.6 40.4 20.5 101 123 123
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## rad.96 rad.168 rad.mn rain.rate.1 rain.rate.4 rain.rate.6
## Class numeric numeric numeric numeric numeric numeric
## Minimum 114 138 138 0 0 0
## Maximum 114 138 138 0 0 0
## Mean 114 138 138 0 0 0
## Unique (excld. NA) 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## rain.rate.12 rain.rate.24 rain.rate.48 rain.rate.72
## Class numeric numeric numeric numeric
## Minimum 0.117 0.0583 0.0667 0.236
## Maximum 0.117 0.0583 0.0667 0.236
## Mean 0.117 0.0583 0.0667 0.236
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.96 rain.rate.168 rain.rate.mn rh.1 rh.4
## Class numeric numeric numeric numeric numeric
## Minimum 0.298 0.227 0.227 59.8 68.3
## Maximum 0.298 0.227 0.227 59.8 68.3
## Mean 0.298 0.227 0.227 59.8 68.3
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## rh.6 rh.12 rh.24 rh.48 rh.72 rh.96 rh.168
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 72 80 79.5 80.6 80.5 82.1 81.7
## Maximum 72 80 79.5 80.6 80.5 82.1 81.7
## Mean 72 80 79.5 80.6 80.5 82.1 81.7
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## rh.mn first.row.in.file.int last.row.in.file.int n.ints
## Class numeric numeric numeric integer
## Minimum 81.7 5 325 321
## Maximum 81.7 971 1290 321
## Mean 81.7 488 808 321
## Unique (excld. NA) 1 4 4 1
## Missing values 0 0 0 0
## Sorted TRUE FALSE FALSE TRUE
##
## dt1 j.rel1 j.NH31 dt.min dt.max ct.min ct.max
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.5 0.0124 0.703 0.5 0.5 0.5 160
## Maximum 0.5 0.0204 1.16 0.5 0.5 0.5 160
## Mean 0.5 0.0163 0.925 0.5 0.5 0.5 160
## Unique (excld. NA) 1 4 4 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE FALSE FALSE TRUE TRUE TRUE TRUE
##
## t.start.p t.end.p air.temp.z
## Class POSIXct, POSIXt POSIXct, POSIXt numeric
## Minimum 2019-08-14 17:30:00 2019-08-21 09:30:00 2
## Maximum 2019-08-14 17:30:00 2019-08-21 09:30:00 2
## Mean 2019-08-14 17:30:00 2019-08-21 09:30:00 2
## Unique (excld. NA) 1 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## soil.temp.z wind.z wind.loc far.loc
## Class numeric numeric character logical
## Minimum 0.1 2 Field <NA>
## Maximum 0.1 2 Field <NA>
## Mean 0.1 2 <NA> <NA>
## Unique (excld. NA) 1 1 1 0
## Missing values 0 0 0 4
## Sorted TRUE TRUE TRUE <NA>
##
## pub.info
## Class character
## Minimum Kamp, J.N.; Häni, C.; Nyord, T.; Feilberg, A.; Sørensen, L.L. Calculation of NH3 Emissions, Evaluation of Backward Lagrangian Stochastic Dispersion Model and Aerodynamic Gradient Method. Atmosphere 2021, 12, 102. https://doi.org/10.3390/atmos12010102
## Maximum Kamp, J.N.; Häni, C.; Nyord, T.; Feilberg, A.; Sørensen, L.L. Calculation of NH3 Emissions, Evaluation of Backward Lagrangian Stochastic Dispersion Model and Aerodynamic Gradient Method. Atmosphere 2021, 12, 102. https://doi.org/10.3390/atmos12010102
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE AGM micro met
## Maximum <NA> <NA> <NA> FALSE bLS micro met
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 2 1
## Missing values 4 4 4 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig app.method2
## Class character character character character
## Minimum Grass Mix Open slot injection os
## Maximum Grass Mix Open slot injection os
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## incorp.orig date.start
## Class logical Date
## Minimum <NA> 2019-08-14
## Maximum <NA> 2019-08-14
## Mean <NA> <NA>
## Unique (excld. NA) 0 1
## Missing values 4 0
## Sorted <NA> TRUE
## Interval-level emission data
##
## 1284 rows and 138 columns
## 1284 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:AGM.R:1.R2:.T:2019-08-14 06:00:00.M:AGMNA
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:MD.R:1.R2:.T:2019-08-14 06:00:00.M:bLSMD
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field
## Class character character character character
## Minimum Atmos1 Vejrumbro_2019 Vejrumbro_2019_Aug
## Maximum Atmos1 Vejrumbro_2019 Vejrumbro_2019_Aug
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## plot rep treat meas.tech meas.tech.det plot.area
## Class numeric numeric character character character numeric
## Minimum 1 1 AGM AGM CRDS_1m 260000
## Maximum 1 1 MD bLS MD 260000
## Mean 1 1 <NA> <NA> <NA> 260000
## Unique (excld. NA) 1 1 4 2 3 1
## Missing values 0 0 0 0 321 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character logical logical logical
## Minimum 56.5 9.54 DK Flat <NA> <NA> <NA>
## Maximum 56.5 9.54 DK Flat <NA> <NA> <NA>
## Mean 56.5 9.54 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1 0 0 0
## Missing values 0 0 0 0 1284 1284 1284
## Sorted TRUE TRUE TRUE TRUE <NA> <NA> <NA>
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class logical character logical logical logical logical
## Minimum <NA> Loam <NA> <NA> <NA> <NA>
## Maximum <NA> Loam <NA> <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 0 0 0 0
## Missing values 1284 0 1284 1284 1284 1284
## Sorted <NA> TRUE <NA> <NA> <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det
## Class logical character character character logical
## Minimum <NA> No No mix <NA>
## Maximum <NA> No No mix <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 1 0
## Missing values 1284 0 0 0 1284
## Sorted <NA> TRUE TRUE TRUE <NA>
##
## man.bed man.con man.trt1 man.trt2 man.stor
## Class logical character character logical logical
## Minimum <NA> Slurry Anaerobic digestion <NA> <NA>
## Maximum <NA> Slurry Anaerobic digestion <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 0 0
## Missing values 1284 0 0 1284 1284
## Sorted <NA> TRUE TRUE <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical logical
## Minimum 3.31 <NA> 2.79 1.62 <NA> <NA> <NA>
## Maximum 3.31 <NA> 2.79 1.62 <NA> <NA> <NA>
## Mean 3.31 <NA> 2.79 1.62 <NA> <NA> <NA>
## Unique (excld. NA) 1 0 1 1 0 0 0
## Missing values 0 1284 0 0 1284 1284 1284
## Sorted TRUE <NA> TRUE TRUE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 7.7 2019-08-14 06:00:00 2019-08-14 16:00:00 os
## Maximum 7.7 2019-08-14 06:00:00 2019-08-14 16:00:00 os
## Mean 7.7 2019-08-14 06:00:00 2019-08-14 16:00:00 <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric logical
## Minimum 35 t/ha <NA> <NA> <NA>
## Maximum 35 t/ha <NA> <NA> <NA>
## Mean 35 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0
## Missing values 0 0 1284 1284 1284
## Sorted TRUE TRUE <NA> <NA> <NA>
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class numeric numeric logical character numeric numeric
## Minimum 17 4 <NA> grass 15 <NA>
## Maximum 17 4 <NA> grass 15 <NA>
## Mean 17 4 <NA> <NA> 15 <NA>
## Unique (excld. NA) 1 1 0 1 1 0
## Missing values 0 0 1284 0 0 1284
## Sorted TRUE TRUE <NA> TRUE TRUE <NA>
##
## lai notes.plot row.in.file.plot man.trt3 institute
## Class logical character numeric logical character
## Minimum <NA> . 5 <NA> AU
## Maximum <NA> . 5 <NA> AU
## Mean <NA> <NA> 5 <NA> <NA>
## Unique (excld. NA) 0 1 1 0 1
## Missing values 1284 0 0 1284 0
## Sorted <NA> TRUE TRUE <NA> TRUE
##
## sub.period
## Class numeric
## Minimum 3
## Maximum 3
## Mean 3
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 14-08-2019 06:00 14-08-2019 16:00
## Maximum 14-08-2019 06:00 14-08-2019 16:00
## Mean <NA> <NA>
## Unique (excld. NA) 1 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:AGM.R:1.R2:.T:2019-08-14 06:00:00
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.F:../../data-submitted/03/AU/ALFAM2_JNK_2019_Aug_5_5_b.xlsx.E:Vejrumbro_2019_Aug.F:.P:1.T:MD.R:1.R2:.T:2019-08-14 06:00:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot
## Class character character
## Minimum D:1.I:AU.Pr:Vejrumbro_2019.E:Vejrumbro_2019_Aug
## Maximum D:1.I:AU.Pr:Vejrumbro_2019.E:Vejrumbro_2019_Aug
## Mean <NA> <NA>
## Unique (excld. NA) 1 1
## Missing values 0 0
## Sorted TRUE TRUE
##
## submitter tan.app interval t.start
## Class character numeric numeric POSIXct, POSIXt
## Minimum Jesper Nørlem Kamp 56.7 1 2019-08-14 17:30:00
## Maximum Jesper Nørlem Kamp 56.7 321 2019-08-21 09:30:00
## Mean <NA> 56.7 161 2019-08-18 01:30:00
## Unique (excld. NA) 1 1 321 321
## Missing values 0 0 0 0
## Sorted TRUE TRUE FALSE FALSE
##
## t.end dt bg.dl bg.val bg.unit j.NH3
## Class POSIXct, POSIXt numeric logical logical logical numeric
## Minimum 2019-08-14 18:00:00 0.5 <NA> <NA> <NA> -0.00237
## Maximum 2019-08-21 10:00:00 0.5 <NA> <NA> <NA> 1.16
## Mean 2019-08-18 02:00:00 0.5 <NA> <NA> <NA> 0.079
## Unique (excld. NA) 321 1 0 0 0 1267
## Missing values 0 0 1284 1284 1284 0
## Sorted FALSE TRUE <NA> <NA> <NA> FALSE
##
## j.NH3.unit pH.surf air.temp air.temp.z soil.temp soil.temp.z
## Class character logical numeric numeric numeric numeric
## Minimum kg N/ha-hr <NA> 10.6 2 15.7 0.1
## Maximum kg N/ha-hr <NA> 20.4 2 18 0.1
## Mean <NA> <NA> 14.9 2 16.9 0.1
## Unique (excld. NA) 1 0 72 1 24 1
## Missing values 0 1284 0 0 0 0
## Sorted TRUE <NA> FALSE TRUE FALSE TRUE
##
## soil.temp.surf rad wind wind.z MOL ustar
## Class numeric numeric numeric numeric numeric numeric
## Minimum 10 0 0.958 2 -16700 0.0476
## Maximum 21.1 634 6.26 2 7210 0.539
## Mean 14.9 138 3 2 -27.9 0.249
## Unique (excld. NA) 81 97 321 1 306 320
## Missing values 0 0 0 0 4 4
## Sorted FALSE FALSE FALSE TRUE FALSE FALSE
##
## rl air.pres air.pres.unit rain rh wind.loc
## Class numeric numeric character numeric numeric character
## Minimum 3.42e-05 98100 Pa 0 54.6 Field
## Maximum 0.177 1e+05 Pa 3 93 Field
## Mean 0.016 99000 <NA> 0.113 81.7 <NA>
## Unique (excld. NA) 306 321 1 13 115 1
## Missing values 4 0 0 0 0 0
## Sorted FALSE FALSE TRUE FALSE FALSE TRUE
##
## far.loc notes.int row.in.file.int j.type fromemis
## Class logical character numeric character numeric
## Minimum <NA> . 5 emission rate 1
## Maximum <NA> . 1290 emission rate 1
## Mean <NA> <NA> 648 <NA> 1
## Unique (excld. NA) 0 1 1284 1 1
## Missing values 1284 1283 0 0 0
## Sorted <NA> TRUE FALSE TRUE TRUE
##
## t.start.orig t.end.orig j.NH3.unit.orig
## Class character character character
## Minimum '14-08-2019 17:30' '14-08-2019 17:30' µg NH3/m2/s
## Maximum '21-08-2019 09:30' '21-08-2019 09:30' µg NH3/m2/s
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 321 321 1
## Missing values 0 0 0
## Sorted FALSE FALSE TRUE
##
## j.NH3.orig j.NH3.conv.fact dt.calc dt.diff ct mt
## Class numeric numeric numeric numeric numeric numeric
## Minimum -0.0802 0.0296 0.5 0 0.5 0.25
## Maximum 39.1 0.0296 0.5 0 160 160
## Mean 2.01 0.0296 0.5 0 80.5 80.2
## Unique (excld. NA) 934 1 1 1 321 321
## Missing values 350 0 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE FALSE FALSE
##
## cta bta flag.int rain.rate rain.cum wind.2m
## Class numeric numeric character numeric numeric numeric
## Minimum 12 11.5 0 0 0.958
## Maximum 172 172 m i 6 36.4 6.26
## Mean 92 91.5 <NA> 0.227 18.3 3
## Unique (excld. NA) 321 321 2 13 59 321
## Missing values 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.int e.cum e e.rel j.rel
## Class numeric numeric numeric numeric numeric
## Minimum -0.00119 0.351 0.351 0.0062 -4.19e-05
## Maximum 0.579 15.5 15.5 0.274 0.0204
## Mean 0.0395 11.3 11.3 0.199 0.00139
## Unique (excld. NA) 1267 1283 1283 1283 1267
## Missing values 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE
##
## pub.info
## Class character
## Minimum Kamp, J.N.; Häni, C.; Nyord, T.; Feilberg, A.; Sørensen, L.L. Calculation of NH3 Emissions, Evaluation of Backward Lagrangian Stochastic Dispersion Model and Aerodynamic Gradient Method. Atmosphere 2021, 12, 102. https://doi.org/10.3390/atmos12010102
## Maximum Kamp, J.N.; Häni, C.; Nyord, T.; Feilberg, A.; Sørensen, L.L. Calculation of NH3 Emissions, Evaluation of Backward Lagrangian Stochastic Dispersion Model and Aerodynamic Gradient Method. Atmosphere 2021, 12, 102. https://doi.org/10.3390/atmos12010102
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## soil.type2 exper2 rep2 acid meas.tech.orig meas.tech2
## Class logical logical logical logical character character
## Minimum <NA> <NA> <NA> FALSE AGM micro met
## Maximum <NA> <NA> <NA> FALSE bLS micro met
## Mean <NA> <NA> <NA> 0 TRUE <NA> <NA>
## Unique (excld. NA) 0 0 0 1 2 1
## Missing values 1284 1284 1284 0 0 0
## Sorted <NA> <NA> <NA> TRUE TRUE TRUE
##
## crop.orig man.source.orig app.method.orig app.method2
## Class character character character character
## Minimum Grass Mix Open slot injection os
## Maximum Grass Mix Open slot injection os
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## incorp.orig date.start first.row.int row.plot
## Class logical Date numeric numeric
## Minimum <NA> 2019-08-14 5 5
## Maximum <NA> 2019-08-14 971 5
## Mean <NA> <NA> 488 5
## Unique (excld. NA) 0 1 4 1
## Missing values 1284 0 0 0
## Sorted <NA> TRUE FALSE TRUE
##
## first.rows ggplotgroup
## Class factor numeric
## Minimum Plots 5 Emis. 327 1
## Maximum Plots 5 Emis. 971 1
## Mean Plots 5 Emis. 5 1
## Unique (excld. NA) 4 1
## Missing values 0 0
## Sorted FALSE TRUE
##