Submitted data error checks
0. Instructions for submitters
Submitters should use this file to check for problems with submitted data. Send either a list of problems or confirmation that everything looks OK to Sasha by email. Be sure to reference the dataset version and file creation date/time when doing so. These are:
## Version: 2.47## [1] "Date/time: 2024-04-04 14:51:50.065944"Each of these html files contains a summary of the data from a single submitted spreadsheet file. The html name is based on the name of the submitted file. Use the details below to check:
- Institute abbreviation, submitter and contributor names
- The plot location(s), using the map zoom and pan features if needed
- For problems in the first sections; “OK” means there are no problems in a particular section, “warning” is something that should be checked (but might be OK), “error” is a problem that needs to be addressed
- For numeric values outside the expected range in the “Value checks” section
- Variables with missing values–are there any missing that you thought you included?
- Plots of flux, cumulative emission over time, and final cumulative emission for strange patterns, unexpectedly high or low values
- Plots of weather data for appropriate differences between plots and expected diurnal or other patterns
- Plots of manure and application data for correct values
Finally, the numeric summary at the end might provide details that can help in pinpointing problems, but typically does not need to be checked.
1. Submitter
| inst.abbrev | submitter | version | date |
|---|---|---|---|
| AU-BCE | Sommer Sven Gjedde | 1 | 13.06.2022 |
2. Contributors
| contributor | institute |
|---|---|
| Martin Nørregård Hansen | SEGES, Aarhus, Denmark |
| Sven G. Sommer | Aarhus University, Denmark |
3. File and directory names
## [1] "../../data-submitted/03/AU"## [1] "../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx"4. Location
5.Keys and codes
Codes in Treatments sheet
## OK## OKCodes in Plots sheet
## OK## OKCodes in Emission sheet
## OK## OKCode merge check (matching project, experiment, field, plot, treatment)
## OK## OK## OK## OK## OK6. Publication info
Check for missing codes
## [1] "Missing pub codes in Publications sheet."## [1] "Some pub codes missing in Experiments sheet."Complete citations given
## OK## OK7. Emission sheet
Duplicated intervals
## OKMissing incorporation time
## OKDelay after application
## bta (cum. time since application began) is not available.Missing or double interval number
## OK
## OK
## OK
## OKMissing time between intervals
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."
## [1] "No start or end times provided, so cannot check for missing time."Measurement method and units
Measurement technique:
| Method | Frequency |
|---|---|
| ZINST | 24 |
Measurement technique classification:
| Classification | Frequency |
|---|---|
| micro met | 24 |
Emission units and conversion factors.
| Original unit | Conversion factor applied | Final unit |
|---|---|---|
| kg N/ha-hr | 1 | kg N/ha-hr |
7. Value checks
Check to see if submitted values are within a reasonable range.
Weather
## wind : OK
## rain.rate : OK
## air.temp : OK
## soil.temp : No values to check.
## soil.temp.surf : No values to check.
## air.temp.z : OK
## wind.z : OKManure and application
## man.stor : No values to check.
## man.dm : Some values out of range
## [1] 31.6 37.3
## man.vs : No values to check.
## man.tkn : OK
## man.tan : OK
## man.tic : No values to check.
## man.ua : No values to check.
## man.vfa : No values to check.
## man.ph : OK
## app.rate : OK
## crop.z : OKEmission
## j.NH3 : OK
## e.int : OK
## e.rel : OK8. Missing values
Check for missing values.
All variables
## Some values missing:
## Table below has number of missing observations by variable:
## silt soil.water soil.water.v soil.moist soil.ph
## 24 24 24 24 24
## soil.dens man.trt2 man.trt3 man.stor man.vs
## 24 24 24 24 24
## man.tic man.ua man.vfa time.incorp dist.inj
## 24 24 24 6 24
## furrow.z furrow.w lai notes.plot t.start
## 6 24 24 18 24
## t.end bg.dl bg.val bg.unit pH.surf
## 24 24 24 24 24
## soil.temp soil.temp.z soil.temp.surf rad MOL
## 24 24 24 24 24
## ustar rl air.pres air.pres.unit rh
## 24 24 24 24 24
## notes.int t.start.orig t.end.orig dt.calc dt.diff
## 23 24 24 24 24
## bta pub.info soil.type2 exper2 rep2
## 24 24 24 24 24
## date.start
## 24Application method and measurement method
## OK## OK9. Plots
Calculated cumulative emission
Cumulative emission. Missing values imputed (linear interpolation). Numeric labels show position of data in data file: row in the “Plots” sheet and first row in the “Emission” sheet. Labels in center of the first plot have measurement method, manure source, and application method. The same emission data are plotted a few different ways to facilitate checking for problems, e.g., comparing plot to each other or checking application dates. The same colors should be be used for particular field plots throughout this section.
Final cumulative emission
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Relative versus absolute emission
Flux
Weather data
Manure and application
| institute | proj | exper | field | plot | man.dm | man.ph | man.tan | app.rate | tan.app |
|---|---|---|---|---|---|---|---|---|---|
| AU-BCE | 1 | 1 | 1 | 1 | 37.3 | 8.6 | 0.86 | 13.6 | 11.696 |
| AU-BCE | 1 | 1 | 1 | 2 | 32.8 | 8.8 | 0.99 | 18.2 | 18.018 |
| AU-BCE | 1 | 1 | 1 | 3 | 31.6 | 8.6 | 1.08 | 19.6 | 21.168 |
| AU-BCE | 1 | 1 | 1 | 4 | 33.8 | 8.7 | 1.27 | 18.5 | 23.495 |
10. dfsumm summary
Plot-level data
##
## 4 rows and 184 columns
## 4 unique rows
## pub.id
## Class character
## Minimum 1
## Maximum 1
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## cpmid
## Class character
## Minimum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:1.T:1.R:1.R2:.T:2004-04-22 09:00:00.M:ZINSTLeuning passive flux sampler
## Maximum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:4.T:4.R:1.R2:.T:2004-04-22 10:30:00.M:ZINSTLeuning passive flux sampler
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## proj exper field plot rep plot.area
## Class character character character numeric numeric numeric
## Minimum 1 1 1 1 1 1260
## Maximum 1 1 1 4 1 1260
## Mean <NA> <NA> <NA> 2.5 1 1260
## Unique (excld. NA) 1 1 1 4 1 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character numeric logical numeric
## Minimum 55.9 10.1 DK Flat 13.1 <NA> 81.7
## Maximum 55.9 10.1 DK Flat 13.1 <NA> 81.7
## Mean 55.9 10.1 <NA> <NA> 13.1 <NA> 81.7
## Unique (excld. NA) 1 1 1 1 1 0 1
## Missing values 0 0 0 0 0 4 0
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> TRUE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class numeric character logical logical logical logical
## Minimum 2.2 Sand <NA> <NA> <NA> <NA>
## Maximum 2.2 Sand <NA> <NA> <NA> <NA>
## Mean 2.2 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0 0
## Missing values 0 0 4 4 4 4
## Sorted TRUE TRUE <NA> <NA> <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det
## Class logical character character character character
## Minimum <NA> No No cat Dairy
## Maximum <NA> No No cat Dairy
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 1 1
## Missing values 4 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3 man.stor
## Class character character character logical logical logical
## Minimum Straw Solid None <NA> <NA> <NA>
## Maximum Straw Solid None <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0 0
## Missing values 0 0 0 4 4 4
## Sorted TRUE TRUE TRUE <NA> <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical logical
## Minimum 31.6 <NA> 6 0.86 <NA> <NA> <NA>
## Maximum 37.3 <NA> 7.4 1.27 <NA> <NA> <NA>
## Mean 33.9 <NA> 6.6 1.05 <NA> <NA> <NA>
## Unique (excld. NA) 4 0 4 4 0 0 0
## Missing values 0 4 0 0 4 4 4
## Sorted FALSE <NA> FALSE TRUE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 8.6 2004-04-22 09:00:00 2004-04-22 09:30:00 bc
## Maximum 8.8 2004-04-22 10:30:00 2004-04-22 11:00:00 bc
## Mean 8.68 2004-04-22 09:45:00 2004-04-22 10:15:00 <NA>
## Unique (excld. NA) 3 4 4 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric numeric
## Minimum 13.6 t/ha deep 0.0833 100
## Maximum 19.6 t/ha shallow 6 100
## Mean 17.5 <NA> <NA> 2.14 100
## Unique (excld. NA) 4 1 3 3 1
## Missing values 0 0 0 1 0
## Sorted FALSE TRUE FALSE FALSE TRUE
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical numeric logical character numeric numeric
## Minimum <NA> 10 <NA> bare soil 0 0
## Maximum <NA> 20 <NA> bare soil 0 0
## Mean <NA> 13.3 <NA> <NA> 0 0
## Unique (excld. NA) 0 2 0 1 1 1
## Missing values 4 1 4 0 0 0
## Sorted <NA> FALSE <NA> TRUE TRUE TRUE
##
## lai notes.plot row.in.file.plot institute sub.period
## Class logical character numeric character numeric
## Minimum <NA> . 5 AU-BCE 3
## Maximum <NA> . 8 AU-BCE 3
## Mean <NA> <NA> 6.5 <NA> 3
## Unique (excld. NA) 0 1 4 1 1
## Missing values 4 3 0 0 0
## Sorted <NA> TRUE TRUE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## treat meas.tech meas.tech.det
## Class numeric character character
## Minimum 1 ZINST Leuning passive flux sampler
## Maximum 4 ZINST Leuning passive flux sampler
## Mean 2.5 <NA> <NA>
## Unique (excld. NA) 4 1 1
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 22-04-2004 09:00 22-04-2004 09:30
## Maximum 22-04-2004 10:30 22-04-2004 11:00
## Mean <NA> <NA>
## Unique (excld. NA) 4 4
## Missing values 0 0
## Sorted TRUE TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:1.T:1.R:1.R2:.T:2004-04-22 09:00:00
## Maximum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:4.T:4.R:1.R2:.T:2004-04-22 10:30:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU-BCE.Pr:1.E:1 Sommer Sven Gjedde 11.7
## Maximum D:1.I:AU-BCE.Pr:1.E:1 Sommer Sven Gjedde 23.5
## Mean <NA> <NA> <NA> 18.6
## Unique (excld. NA) 1 1 1 4
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## e.1 e.4 e.6 e.12 e.24 e.48 e.72
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum <NA> 1.7 2.11 2.12 2.13 2.3 2.43
## Maximum <NA> 6.67 7.75 7.87 8.12 8.83 9.08
## Mean <NA> 3.35 3.98 4.14 4.45 5.22 5.56
## Unique (excld. NA) 0 4 4 4 4 4 4
## Missing values 4 0 0 0 0 0 0
## Sorted <NA> FALSE FALSE FALSE FALSE FALSE FALSE
##
## e.96 e.168 e.final e.tot e.cum.1 e.cum.4 e.cum.6
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 2.45 <NA> 2.42 2.42 <NA> 1.7 2.11
## Maximum 9.08 <NA> 9.08 9.08 <NA> 6.67 7.75
## Mean 5.63 <NA> 5.67 5.67 <NA> 3.35 3.98
## Unique (excld. NA) 4 0 4 4 0 4 4
## Missing values 0 4 0 0 4 0 0
## Sorted FALSE <NA> FALSE FALSE <NA> FALSE FALSE
##
## e.cum.12 e.cum.24 e.cum.48 e.cum.72 e.cum.96 e.cum.168
## Class numeric numeric numeric numeric numeric numeric
## Minimum 2.12 2.13 2.3 2.43 2.45 <NA>
## Maximum 7.87 8.12 8.83 9.08 9.08 <NA>
## Mean 4.14 4.45 5.22 5.56 5.63 <NA>
## Unique (excld. NA) 4 4 4 4 4 0
## Missing values 0 0 0 0 0 4
## Sorted FALSE FALSE FALSE FALSE FALSE <NA>
##
## e.cum.final e.cum.tot e.rel.1 e.rel.4 e.rel.6 e.rel.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 2.42 2.42 <NA> 0.0801 0.117 0.117
## Maximum 9.08 9.08 <NA> 0.284 0.33 0.335
## Mean 5.67 5.67 <NA> 0.183 0.217 0.227
## Unique (excld. NA) 4 4 0 4 4 4
## Missing values 0 0 4 0 0 0
## Sorted FALSE FALSE <NA> FALSE FALSE FALSE
##
## e.rel.24 e.rel.48 e.rel.72 e.rel.96 e.rel.168 e.rel.final
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0.118 0.128 0.135 0.136 <NA> 0.135
## Maximum 0.368 0.453 0.487 0.489 <NA> 0.486
## Mean 0.246 0.292 0.311 0.315 <NA> 0.317
## Unique (excld. NA) 4 4 4 4 0 4
## Missing values 0 0 0 0 4 0
## Sorted FALSE FALSE FALSE FALSE <NA> FALSE
##
## e.rel.tot rain.1 rain.4 rain.6 rain.12 rain.24 rain.48
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0.135 <NA> 0 0 0 0 0
## Maximum 0.486 <NA> 0 0 0 0 0
## Mean 0.317 <NA> 0 0 0 0 0
## Unique (excld. NA) 4 0 1 1 1 1 1
## Missing values 0 4 0 0 0 0 0
## Sorted FALSE <NA> TRUE TRUE TRUE TRUE TRUE
##
## rain.72 rain.96 rain.168 rain.final rain.tot air.temp.1
## Class numeric numeric numeric numeric numeric numeric
## Minimum 0 2.72 <NA> 7 7 <NA>
## Maximum 0 2.72 <NA> 7 7 <NA>
## Mean 0 2.72 <NA> 7 7 <NA>
## Unique (excld. NA) 1 1 0 1 1 0
## Missing values 0 0 4 0 0 4
## Sorted TRUE TRUE <NA> TRUE TRUE <NA>
##
## air.temp.4 air.temp.6 air.temp.12 air.temp.24 air.temp.48
## Class numeric numeric numeric numeric numeric
## Minimum 12 13.5 13.5 13.5 10.9
## Maximum 12 13.5 13.5 13.5 10.9
## Mean 12 13.5 13.5 13.5 10.9
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## air.temp.72 air.temp.96 air.temp.168 air.temp.mn wind.1
## Class numeric numeric numeric numeric numeric
## Minimum 10.4 10.3 10.2 10.2 <NA>
## Maximum 10.4 10.3 10.2 10.2 <NA>
## Mean 10.4 10.3 10.2 10.2 <NA>
## Unique (excld. NA) 1 1 1 1 0
## Missing values 0 0 0 0 4
## Sorted TRUE TRUE TRUE TRUE <NA>
##
## wind.4 wind.6 wind.12 wind.24 wind.48 wind.72 wind.96
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 5 2.75 2.75 2.75 2.19 2.08 2.06
## Maximum 5 2.75 2.75 2.75 2.19 2.08 2.06
## Mean 5 2.75 2.75 2.75 2.19 2.08 2.06
## Unique (excld. NA) 1 1 1 1 1 1 1
## Missing values 0 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE TRUE
##
## wind.168 wind.mn wind.2m.1 wind.2m.4 wind.2m.6 wind.2m.12
## Class numeric numeric numeric numeric numeric numeric
## Minimum 2.04 2.04 <NA> 3.84 2.11 2.11
## Maximum 2.04 2.04 <NA> 3.84 2.11 2.11
## Mean 2.04 2.04 <NA> 3.84 2.11 2.11
## Unique (excld. NA) 1 1 0 1 1 1
## Missing values 0 0 4 0 0 0
## Sorted TRUE TRUE <NA> TRUE TRUE TRUE
##
## wind.2m.24 wind.2m.48 wind.2m.72 wind.2m.96 wind.2m.168
## Class numeric numeric numeric numeric numeric
## Minimum 2.11 1.68 1.6 1.58 1.56
## Maximum 2.11 1.68 1.6 1.58 1.56
## Mean 2.11 1.68 1.6 1.58 1.56
## Unique (excld. NA) 1 1 1 1 1
## Missing values 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE
##
## wind.2m.mn rain.rate.1 rain.rate.4 rain.rate.6 rain.rate.12
## Class numeric numeric numeric numeric numeric
## Minimum 1.56 <NA> 0 0 0
## Maximum 1.56 <NA> 0 0 0
## Mean 1.56 <NA> 0 0 0
## Unique (excld. NA) 1 0 1 1 1
## Missing values 0 4 0 0 0
## Sorted TRUE <NA> TRUE TRUE TRUE
##
## rain.rate.24 rain.rate.48 rain.rate.72 rain.rate.96
## Class numeric numeric numeric numeric
## Minimum 0 0 0 0
## Maximum 0 0 0 0
## Mean 0 0 0 0
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## rain.rate.168 rain.rate.mn first.row.in.file.int
## Class numeric numeric numeric
## Minimum 0.0579 0.0579 5
## Maximum 0.0579 0.0579 23
## Mean 0.0579 0.0579 14
## Unique (excld. NA) 1 1 4
## Missing values 0 0 0
## Sorted TRUE TRUE TRUE
##
## last.row.in.file.int n.ints dt1 j.rel1 j.NH31 dt.min
## Class numeric integer numeric numeric numeric numeric
## Minimum 10 6 1.5 0.0203 0.43 1.5
## Maximum 28 6 1.5 0.151 3.55 1.5
## Mean 19 6 1.5 0.0945 1.72 1.5
## Unique (excld. NA) 4 1 1 4 4 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE FALSE FALSE TRUE
##
## dt.max ct.min ct.max t.start.p t.end.p
## Class numeric numeric numeric POSIXct, POSIXt POSIXct, POSIXt
## Minimum 40.7 1.5 121 <NA> <NA>
## Maximum 40.7 1.5 121 <NA> <NA>
## Mean 40.7 1.5 121 <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0
## Missing values 0 0 0 4 4
## Sorted TRUE TRUE TRUE <NA> <NA>
##
## air.temp.z soil.temp.z wind.z wind.loc far.loc
## Class numeric logical numeric character numeric
## Minimum 10 <NA> 10 Nearest station 500
## Maximum 10 <NA> 10 Nearest station 500
## Mean 10 <NA> 10 <NA> 500
## Unique (excld. NA) 1 0 1 1 1
## Missing values 0 4 0 0 0
## Sorted TRUE <NA> TRUE TRUE TRUE
##
## pub.info soil.type2 exper2 rep2 acid meas.tech.orig
## Class logical logical logical logical logical character
## Minimum <NA> <NA> <NA> <NA> FALSE ZINST
## Maximum <NA> <NA> <NA> <NA> FALSE ZINST
## Mean <NA> <NA> <NA> <NA> 0 TRUE <NA>
## Unique (excld. NA) 0 0 0 0 1 1
## Missing values 4 4 4 4 0 0
## Sorted <NA> <NA> <NA> <NA> TRUE TRUE
##
## meas.tech2 crop.orig man.source.orig app.method.orig
## Class character character character character
## Minimum micro met Bare soil Cattle Broadcast
## Maximum micro met Bare soil Cattle Broadcast
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## app.method2 incorp.orig date.start
## Class character character Date
## Minimum bc Deep <NA>
## Maximum bc Shallow <NA>
## Mean <NA> <NA> <NA>
## Unique (excld. NA) 1 3 0
## Missing values 0 0 4
## Sorted TRUE FALSE <NA>
## Interval-level emission data
##
## 24 rows and 137 columns
## 24 unique rows
## cpmid
## Class character
## Minimum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:1.T:1.R:1.R2:.T:2004-04-22 09:00:00.M:ZINSTLeuning passive flux sampler
## Maximum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:4.T:4.R:1.R2:.T:2004-04-22 10:30:00.M:ZINSTLeuning passive flux sampler
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## pub.id proj exper field plot rep
## Class character character character character numeric numeric
## Minimum 1 1 1 1 1 1
## Maximum 1 1 1 1 4 1
## Mean <NA> <NA> <NA> <NA> 2.5 1
## Unique (excld. NA) 1 1 1 1 4 1
## Missing values 0 0 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE TRUE TRUE
##
## treat meas.tech meas.tech.det plot.area
## Class numeric character character numeric
## Minimum 1 ZINST Leuning passive flux sampler 1260
## Maximum 4 ZINST Leuning passive flux sampler 1260
## Mean 2.5 <NA> <NA> 1260
## Unique (excld. NA) 4 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## lat long country topo clay silt sand
## Class numeric numeric character character numeric logical numeric
## Minimum 55.9 10.1 DK Flat 13.1 <NA> 81.7
## Maximum 55.9 10.1 DK Flat 13.1 <NA> 81.7
## Mean 55.9 10.1 <NA> <NA> 13.1 <NA> 81.7
## Unique (excld. NA) 1 1 1 1 1 0 1
## Missing values 0 0 0 0 0 24 0
## Sorted TRUE TRUE TRUE TRUE TRUE <NA> TRUE
##
## oc soil.type soil.water soil.water.v soil.moist soil.ph
## Class numeric character logical logical logical logical
## Minimum 2.2 Sand <NA> <NA> <NA> <NA>
## Maximum 2.2 Sand <NA> <NA> <NA> <NA>
## Mean 2.2 <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 0 0 0 0
## Missing values 0 0 24 24 24 24
## Sorted TRUE TRUE <NA> <NA> <NA> <NA>
##
## soil.dens crop.res till man.source man.source.det
## Class logical character character character character
## Minimum <NA> No No cat Dairy
## Maximum <NA> No No cat Dairy
## Mean <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 0 1 1 1 1
## Missing values 24 0 0 0 0
## Sorted <NA> TRUE TRUE TRUE TRUE
##
## man.bed man.con man.trt1 man.trt2 man.trt3 man.stor
## Class character character character logical logical logical
## Minimum Straw Solid None <NA> <NA> <NA>
## Maximum Straw Solid None <NA> <NA> <NA>
## Mean <NA> <NA> <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 0 0 0
## Missing values 0 0 0 24 24 24
## Sorted TRUE TRUE TRUE <NA> <NA> <NA>
##
## man.dm man.vs man.tkn man.tan man.tic man.ua man.vfa
## Class numeric logical numeric numeric logical logical logical
## Minimum 31.6 <NA> 6 0.86 <NA> <NA> <NA>
## Maximum 37.3 <NA> 7.4 1.27 <NA> <NA> <NA>
## Mean 33.9 <NA> 6.6 1.05 <NA> <NA> <NA>
## Unique (excld. NA) 4 0 4 4 0 0 0
## Missing values 0 24 0 0 24 24 24
## Sorted FALSE <NA> FALSE TRUE <NA> <NA> <NA>
##
## man.ph app.start app.end app.method
## Class numeric POSIXct, POSIXt POSIXct, POSIXt character
## Minimum 8.6 2004-04-22 09:00:00 2004-04-22 09:30:00 bc
## Maximum 8.8 2004-04-22 10:30:00 2004-04-22 11:00:00 bc
## Mean 8.68 2004-04-22 09:45:00 2004-04-22 10:15:00 <NA>
## Unique (excld. NA) 3 4 4 1
## Missing values 0 0 0 0
## Sorted FALSE TRUE TRUE TRUE
##
## app.rate app.rate.unit incorp time.incorp man.area
## Class numeric character character numeric numeric
## Minimum 13.6 t/ha deep 0.0833 100
## Maximum 19.6 t/ha shallow 6 100
## Mean 17.5 <NA> <NA> 2.14 100
## Unique (excld. NA) 4 1 3 3 1
## Missing values 0 0 0 6 0
## Sorted FALSE TRUE FALSE FALSE TRUE
##
## dist.inj furrow.z furrow.w crop crop.z crop.area
## Class logical numeric logical character numeric numeric
## Minimum <NA> 10 <NA> bare soil 0 0
## Maximum <NA> 20 <NA> bare soil 0 0
## Mean <NA> 13.3 <NA> <NA> 0 0
## Unique (excld. NA) 0 2 0 1 1 1
## Missing values 24 6 24 0 0 0
## Sorted <NA> FALSE <NA> TRUE TRUE TRUE
##
## lai notes.plot row.in.file.plot institute sub.period
## Class logical character numeric character numeric
## Minimum <NA> . 5 AU-BCE 3
## Maximum <NA> . 8 AU-BCE 3
## Mean <NA> <NA> 6.5 <NA> 3
## Unique (excld. NA) 0 1 4 1 1
## Missing values 24 18 0 0 0
## Sorted <NA> TRUE TRUE TRUE TRUE
##
## file
## Class character
## Minimum ../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx
## Maximum ../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx
## Mean <NA>
## Unique (excld. NA) 1
## Missing values 0
## Sorted TRUE
##
## app.start.orig app.end.orig
## Class character character
## Minimum 22-04-2004 09:00 22-04-2004 09:30
## Maximum 22-04-2004 10:30 22-04-2004 11:00
## Mean <NA> <NA>
## Unique (excld. NA) 4 4
## Missing values 0 0
## Sorted TRUE TRUE
##
## cpid
## Class character
## Minimum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:1.T:1.R:1.R2:.T:2004-04-22 09:00:00
## Maximum D:1.I:AU-BCE.Pr:1.F:../../data-submitted/03/AU/ALFAM2_template_6.1 SGS(Rev).xlsx.E:1.F:1.P:4.T:4.R:1.R2:.T:2004-04-22 10:30:00
## Mean <NA>
## Unique (excld. NA) 4
## Missing values 0
## Sorted TRUE
##
## ceid flag.plot submitter tan.app
## Class character character character numeric
## Minimum D:1.I:AU-BCE.Pr:1.E:1 Sommer Sven Gjedde 11.7
## Maximum D:1.I:AU-BCE.Pr:1.E:1 Sommer Sven Gjedde 23.5
## Mean <NA> <NA> <NA> 18.6
## Unique (excld. NA) 1 1 1 4
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## interval t.start t.end dt bg.dl
## Class numeric POSIXct, POSIXt POSIXct, POSIXt numeric logical
## Minimum 1 <NA> <NA> 1.5 <NA>
## Maximum 6 <NA> <NA> 40.7 <NA>
## Mean 3.5 <NA> <NA> 20.1 <NA>
## Unique (excld. NA) 6 0 0 6 0
## Missing values 0 24 24 0 24
## Sorted FALSE <NA> <NA> FALSE <NA>
##
## bg.val bg.unit j.NH3 j.NH3.unit pH.surf air.temp
## Class logical logical numeric character logical numeric
## Minimum <NA> <NA> -0.00109 kg N/ha-hr <NA> 10
## Maximum <NA> <NA> 3.55 kg N/ha-hr <NA> 14
## Mean <NA> <NA> 0.349 <NA> <NA> 11
## Unique (excld. NA) 0 0 22 1 0 3
## Missing values 24 24 0 0 24 0
## Sorted <NA> <NA> FALSE TRUE <NA> FALSE
##
## air.temp.z soil.temp soil.temp.z soil.temp.surf rad
## Class numeric numeric logical logical logical
## Minimum 10 <NA> <NA> <NA> <NA>
## Maximum 10 <NA> <NA> <NA> <NA>
## Mean 10 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 0 0 0 0
## Missing values 0 24 24 24 24
## Sorted TRUE <NA> <NA> <NA> <NA>
##
## wind wind.z MOL ustar rl air.pres
## Class numeric numeric logical logical logical logical
## Minimum 2 10 <NA> <NA> <NA> <NA>
## Maximum 5 10 <NA> <NA> <NA> <NA>
## Mean 2.5 10 <NA> <NA> <NA> <NA>
## Unique (excld. NA) 2 1 0 0 0 0
## Missing values 0 0 24 24 24 24
## Sorted FALSE TRUE <NA> <NA> <NA> <NA>
##
## air.pres.unit rain rh wind.loc far.loc
## Class logical numeric logical character numeric
## Minimum <NA> 0 <NA> Nearest station 500
## Maximum <NA> 7 <NA> Nearest station 500
## Mean <NA> 1.17 <NA> <NA> 500
## Unique (excld. NA) 0 2 0 1 1
## Missing values 24 0 24 0 0
## Sorted <NA> FALSE <NA> TRUE TRUE
##
## notes.int row.in.file.int j.type t.start.orig
## Class character numeric character logical
## Minimum . 5 emission rate <NA>
## Maximum . 28 emission rate <NA>
## Mean <NA> 16.5 <NA> <NA>
## Unique (excld. NA) 1 24 1 0
## Missing values 23 0 0 24
## Sorted TRUE TRUE TRUE <NA>
##
## t.end.orig j.NH3.unit.orig j.NH3.orig j.NH3.conv.fact
## Class logical character numeric numeric
## Minimum <NA> kg N/ha-hr -0.00109 1
## Maximum <NA> kg N/ha-hr 3.55 1
## Mean <NA> <NA> 0.349 1
## Unique (excld. NA) 0 1 22 1
## Missing values 24 0 0 0
## Sorted <NA> TRUE FALSE TRUE
##
## dt.calc dt.diff ct mt cta bta flag.int
## Class logical numeric numeric numeric numeric numeric character
## Minimum <NA> <NA> 1.5 0.75 1.5 <NA>
## Maximum <NA> <NA> 121 101 121 <NA>
## Mean <NA> <NA> 48.2 38.1 48.2 <NA> <NA>
## Unique (excld. NA) 0 0 6 6 6 0 1
## Missing values 24 24 0 0 0 24 0
## Sorted <NA> <NA> FALSE FALSE FALSE <NA> TRUE
##
## rain.rate rain.cum wind.2m e.int e.cum e e.rel
## Class numeric numeric numeric numeric numeric numeric numeric
## Minimum 0 0 1.53 -0.0444 0.645 0.645 0.0305
## Maximum 0.172 7 3.84 5.32 9.08 9.08 0.49
## Mean 0.0287 1.17 1.92 0.946 4.63 4.63 0.257
## Unique (excld. NA) 2 2 2 23 22 22 22
## Missing values 0 0 0 0 0 0 0
## Sorted FALSE FALSE FALSE FALSE FALSE FALSE FALSE
##
## j.rel pub.info soil.type2 exper2 rep2 acid
## Class numeric logical logical logical logical logical
## Minimum -9.33e-05 <NA> <NA> <NA> <NA> FALSE
## Maximum 0.151 <NA> <NA> <NA> <NA> FALSE
## Mean 0.0192 <NA> <NA> <NA> <NA> 0 TRUE
## Unique (excld. NA) 22 0 0 0 0 1
## Missing values 0 24 24 24 24 0
## Sorted FALSE <NA> <NA> <NA> <NA> TRUE
##
## meas.tech.orig meas.tech2 crop.orig man.source.orig
## Class character character character character
## Minimum ZINST micro met Bare soil Cattle
## Maximum ZINST micro met Bare soil Cattle
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 1 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##
## app.method.orig app.method2 incorp.orig date.start
## Class character character character Date
## Minimum Broadcast bc Deep <NA>
## Maximum Broadcast bc Shallow <NA>
## Mean <NA> <NA> <NA> <NA>
## Unique (excld. NA) 1 1 3 0
## Missing values 0 0 0 24
## Sorted TRUE TRUE FALSE <NA>
##
## first.row.int row.plot first.rows ggplotgroup
## Class numeric numeric factor numeric
## Minimum 5 5 Plots 5 Emis. 5 1
## Maximum 23 8 Plots 8 Emis. 23 1
## Mean 14 6.5 Plots 6 Emis. 11 1
## Unique (excld. NA) 4 4 4 1
## Missing values 0 0 0 0
## Sorted TRUE TRUE TRUE TRUE
##